2FUI
NMR solution structure of PHD finger fragment of human BPTF in free state
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 0.60 mM PHD domain U-15N; 20 mM Phosphate buffer pH 7.5; 50 mM KCl; 5 mM DTT; | 90% H2O/10% D2O | 50 mM | 7.5 | 1 atm | 298 | |
2 | 3D_13C-separated_NOESY | 0.64 mM PHD domain U-15N,13C; 20 mM Phosphate buffer pH 7.5; 50 mM KCl; 5 mM DTT; | 90% H2O/10% D2O | 50 mM | 7.5 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
2 | Bruker | AVANCE | 800 |
3 | Bruker | AVANCE | 900 |
NMR Refinement | ||
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Method | Details | Software |
The structure was solved using a simulated annealing by torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 1.5 | Bruker |
2 | collection | VNMR | 1.6c | Varian |
3 | data analysis | CARA | 1.5.3 | Rochus Keller |
4 | structure solution | X-PLOR | 2.13 | G. Marius Clore |
5 | refinement | X-PLOR | 2.13 | G. Marius Clore |