Download MendeleyCrystal structure of Phosphopantetheine adenylyltransferase (TM0741) from Thermotoga maritima at 2.20 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
1VLH
Crystal structure of Phosphopantetheine adenylyltransferase (TM0741) from Thermotoga maritima at 2.20 A resolution
- PDB DOI: https://doi.org/10.2210/pdb1VLH/pdb
- Classification: TRANSFERASE
- Organism(s): Thermotoga maritima
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-07-23 Released: 2004-08-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.227
- R-Value Work: 0.171
- R-Value Observed: 0.173
Starting Model: experimental
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This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phosphopantetheine adenylyltransferase | 173 | Thermotoga maritima | Mutation(s): 0 Gene Names: coaD, kdtB, TM0741 EC: 2.7.7.3 |  | |
UniProt | |||||
Find proteins for Q9WZK0 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9WZK0 Go to UniProtKB: Q9WZK0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9WZK0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PNS Query on PNS | G [auth A] H [auth B] J [auth C] K [auth D] L [auth E] | 4'-PHOSPHOPANTETHEINE C11 H23 N2 O7 P S JDMUPRLRUUMCTL-VIFPVBQESA-N |  | ||
| MPD Query on MPD | I [auth B] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.227
- R-Value Work: 0.171
- R-Value Observed: 0.173
- Space Group: P 1 21 1
- Diffraction Data: https://doi.org/10.18430/M31VLH
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 67.963 | ¦Á = 90 |
| b = 110.876 | ¦Â = 111.98 |
| c = 74.087 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| SCALA | data scaling |
| MOLREP | phasing |
| REFMAC | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Released Date: 2004-08-17 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2004-08-17
Type: Initial release - Version 1.1: 2008-04-26
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance - Version 1.3: 2023-01-25
Changes: Database references, Derived calculations - Version 1.4: 2023-09-20
Changes: Data collection, Refinement description
