E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
Singh, S., Hunt, J.F.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL1 | A [auth 1] | 220 | Escherichia coli | Mutation(s): 0  Gene Names: rplA, b3984, JW3947 | ![]() |
UniProt | |||||
Find proteins for P0A7L0 (Escherichia coli (strain K12)) Explore P0A7L0  Go to UniProtKB:  P0A7L0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7L0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL10 | B [auth 10] | 131 | Escherichia coli | Mutation(s): 0  Gene Names: rplJ, b3985, JW3948 | ![]() |
UniProt | |||||
Find proteins for P0A7J3 (Escherichia coli (strain K12)) Explore P0A7J3  Go to UniProtKB:  P0A7J3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7J3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL11 | C [auth 11] | 141 | Escherichia coli | Mutation(s): 0  Gene Names: rplK, relC, b3983, JW3946 | ![]() |
UniProt | |||||
Find proteins for P0A7J7 (Escherichia coli (strain K12)) Explore P0A7J7  Go to UniProtKB:  P0A7J7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7J7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL13 | D [auth 13] | 142 | Escherichia coli | Mutation(s): 0  Gene Names: rplM, b3231, JW3200 | ![]() |
UniProt | |||||
Find proteins for P0AA10 (Escherichia coli (strain K12)) Explore P0AA10  Go to UniProtKB:  P0AA10 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AA10 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL14 | E [auth 14] | 123 | Escherichia coli | Mutation(s): 0  Gene Names: rplN, b3310, JW3272 | ![]() |
UniProt | |||||
Find proteins for P0ADY3 (Escherichia coli (strain K12)) Explore P0ADY3  Go to UniProtKB:  P0ADY3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADY3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L15 | F [auth 15] | 143 | Escherichia coli | Mutation(s): 0  Gene Names:  rplO, A8C65_19395, A9R57_24660, ACU57_21045, AM464_09135, AUQ13_22145, BHS87_18545, BJJ90_02210, BUE81_25610, BW690_10710... | ![]() |
UniProt | |||||
Find proteins for A0A037Y8L6 (Escherichia coli) Explore A0A037Y8L6  Go to UniProtKB:  A0A037Y8L6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A037Y8L6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L16 | G [auth 16] | 136 | Escherichia coli | Mutation(s): 0  Gene Names: rplP, b3313, JW3275 | ![]() |
UniProt | |||||
Find proteins for P0ADY7 (Escherichia coli (strain K12)) Explore P0ADY7  Go to UniProtKB:  P0ADY7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADY7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL17 | H [auth 17] | 120 | Escherichia coli | Mutation(s): 0  Gene Names: rplQ, b3294, JW3256 | ![]() |
UniProt | |||||
Find proteins for P0AG44 (Escherichia coli (strain K12)) Explore P0AG44  Go to UniProtKB:  P0AG44 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG44 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL18 | I [auth 18] | 116 | Escherichia coli | Mutation(s): 0  Gene Names: rplR, b3304, JW3266 | ![]() |
UniProt | |||||
Find proteins for P0C018 (Escherichia coli (strain K12)) Explore P0C018  Go to UniProtKB:  P0C018 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0C018 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L19 | J [auth 19] | 114 | Escherichia coli | Mutation(s): 0  Gene Names: rplS, A13A_02795 | ![]() |
UniProt | |||||
Find proteins for S1PSA3 (Escherichia coli KTE182) Explore S1PSA3  Go to UniProtKB:  S1PSA3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | S1PSA3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 11 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L2 | K [auth 2] | 271 | Escherichia coli | Mutation(s): 0  Gene Names: rplB, b3317, JW3279 | ![]() |
UniProt | |||||
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422  Go to UniProtKB:  P60422 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60422 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 12 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL20 | L [auth 20] | 117 | Escherichia coli | Mutation(s): 0  Gene Names:  rplT, A5U30_001023, A6592_07370, A8499_000975, A8502_003610, A9X72_11350, AC065_06085, ACN81_10675, ACU57_21960, AM464_26495... | ![]() |
UniProt | |||||
Find proteins for C3T7Q7 (Escherichia coli) Explore C3T7Q7  Go to UniProtKB:  C3T7Q7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3T7Q7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 13 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL21 | M [auth 21] | 103 | Escherichia coli | Mutation(s): 0  Gene Names: rplU, UTI89_C3620 | ![]() |
UniProt | |||||
Find proteins for Q1R6F0 (Escherichia coli (strain UTI89 / UPEC)) Explore Q1R6F0  Go to UniProtKB:  Q1R6F0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q1R6F0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 14 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL22 | N [auth 22] | 110 | Escherichia coli | Mutation(s): 0  Gene Names: rplV, UTI89_C3767 | ![]() |
UniProt | |||||
Find proteins for Q1R610 (Escherichia coli (strain UTI89 / UPEC)) Explore Q1R610  Go to UniProtKB:  Q1R610 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q1R610 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 15 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL23 | O [auth 23] | 93 | Escherichia coli | Mutation(s): 0  Gene Names:  rplW, rplW_1, A5U30_004552, A6592_25795, A8499_003332, A8502_004023, A9X72_02185, AC065_16005, ACN81_25520, ACU57_20960... | ![]() |
UniProt | |||||
Find proteins for C3SQV2 (Escherichia coli) Explore C3SQV2  Go to UniProtKB:  C3SQV2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SQV2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 16 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL24 | P [auth 24] | 102 | Escherichia coli | Mutation(s): 0  Gene Names: rplX | ![]() |
UniProt | |||||
Find proteins for A0A7U9LWC1 (Escherichia coli O145:H28) Explore A0A7U9LWC1  Go to UniProtKB:  A0A7U9LWC1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A7U9LWC1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 17 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL25 | Q [auth 25] | 94 | Escherichia coli | Mutation(s): 0  Gene Names: rplY | ![]() |
UniProt | |||||
Find proteins for P68919 (Escherichia coli (strain K12)) Explore P68919  Go to UniProtKB:  P68919 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68919 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 18 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L27 | R [auth 27] | 75 | Escherichia coli | Mutation(s): 0  Gene Names: rpmA, ECVG_02038 | ![]() |
UniProt | |||||
Find proteins for A0A1X3JCC7 (Escherichia coli H386) Explore A0A1X3JCC7  Go to UniProtKB:  A0A1X3JCC7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1X3JCC7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 19 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L28 | S [auth 28] | 77 | Escherichia coli | Mutation(s): 0  Gene Names: rpmB, G925_03874 | ![]() |
UniProt | |||||
Find proteins for A0A0E2KZD0 (Escherichia coli (strain UMEA 3162-1)) Explore A0A0E2KZD0  Go to UniProtKB:  A0A0E2KZD0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0E2KZD0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 20 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL29 | T [auth 29] | 63 | Escherichia coli | Mutation(s): 0  Gene Names:  rpmC, A5U30_004546, A8502_004029, ACN81_25490, ACU57_20990, AW118_24870, AWP47_12675, B6R15_004075, B6R31_004974, BANRA_01943... | ![]() |
UniProt | |||||
Find proteins for C3SQY2 (Escherichia coli) Explore C3SQY2  Go to UniProtKB:  C3SQY2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SQY2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 21 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L3 | U [auth 3] | 209 | Escherichia coli | Mutation(s): 0  Gene Names: rplC, b3320, JW3282 | ![]() |
UniProt | |||||
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438  Go to UniProtKB:  P60438 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60438 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 22 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L30 | V [auth 30] | 58 | Escherichia coli | Mutation(s): 0  Gene Names: rpmD, b3302, JW3264 | ![]() |
UniProt | |||||
Find proteins for P0AG51 (Escherichia coli (strain K12)) Explore P0AG51  Go to UniProtKB:  P0AG51 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG51 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 23 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL31 | W [auth 31] | 66 | Escherichia coli | Mutation(s): 0  Gene Names: rpmE, b3936, JW3907 | ![]() |
UniProt | |||||
Find proteins for P0A7M9 (Escherichia coli (strain K12)) Explore P0A7M9  Go to UniProtKB:  P0A7M9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7M9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 24 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L32 | X [auth 32] | 56 | Escherichia coli | Mutation(s): 0  Gene Names: rpmF, ECDEC2D_1303 | ![]() |
UniProt | |||||
Find proteins for A0A828UBL8 (Escherichia coli DEC2D) Explore A0A828UBL8  Go to UniProtKB:  A0A828UBL8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A828UBL8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 25 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL33 | Y [auth 33] | 50 | Escherichia coli | Mutation(s): 0  Gene Names: rpmG, b3636, JW3611 | ![]() |
UniProt | |||||
Find proteins for P0A7N9 (Escherichia coli (strain K12)) Explore P0A7N9  Go to UniProtKB:  P0A7N9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7N9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 26 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L34 | Z [auth 34] | 46 | Escherichia coli | Mutation(s): 0  Gene Names: rpmH | ![]() |
UniProt | |||||
Find proteins for B7MGC4 (Escherichia coli O45:K1 (strain S88 / ExPEC)) Explore B7MGC4  Go to UniProtKB:  B7MGC4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B7MGC4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 27 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL35 | AA [auth 35] | 64 | Escherichia coli | Mutation(s): 0  Gene Names: rpmI | ![]() |
UniProt | |||||
Find proteins for P0A7Q2 (Escherichia coli O157:H7) Explore P0A7Q2  Go to UniProtKB:  P0A7Q2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7Q2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 28 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L36 | BA [auth 36] | 38 | Escherichia coli | Mutation(s): 0  Gene Names: rpmJ | ![]() |
UniProt | |||||
Find proteins for A0A0E2L017 (Escherichia coli (strain UMEA 3162-1)) Explore A0A0E2L017  Go to UniProtKB:  A0A0E2L017 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0E2L017 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 29 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL4 | CA [auth 4] | 201 | Escherichia coli | Mutation(s): 0  Gene Names: rplD, eryA, b3319, JW3281 | ![]() |
UniProt | |||||
Find proteins for P60723 (Escherichia coli (strain K12)) Explore P60723  Go to UniProtKB:  P60723 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P60723 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 30 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
50S ribosomal protein L5 | DA [auth 5] | 177 | Escherichia coli | Mutation(s): 0  Gene Names: rplE, CCU01_002520 | ![]() |
UniProt | |||||
Find proteins for A0A4P8BX24 (Escherichia coli O145:NM) Explore A0A4P8BX24  Go to UniProtKB:  A0A4P8BX24 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A4P8BX24 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 31 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein uL6 | EA [auth 6] | 176 | Escherichia coli | Mutation(s): 0  Gene Names:  rplF, A5U30_004539, A8499_003319, A8502_004036, A9X72_02250, AC065_15940, ACN81_25455, ACU57_21025, AM464_09155, APX88_16140... | ![]() |
UniProt | |||||
Find proteins for C3SR17 (Escherichia coli) Explore C3SR17  Go to UniProtKB:  C3SR17 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SR17 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 32 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Large ribosomal subunit protein bL9 | FA [auth 9] | 149 | Escherichia coli | Mutation(s): 0  Gene Names: rplI, b4203, JW4161 | ![]() |
UniProt | |||||
Find proteins for P0A7R1 (Escherichia coli (strain K12)) Explore P0A7R1  Go to UniProtKB:  P0A7R1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7R1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 38 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable ATP-binding protein YbiT | LA [auth Y] | 530 | Escherichia coli | Mutation(s): 0  Gene Names: ybiT, b0820, JW0804 | ![]() |
UniProt | |||||
Find proteins for P0A9U3 (Escherichia coli (strain K12)) Explore P0A9U3  Go to UniProtKB:  P0A9U3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A9U3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 39 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS2 | MA [auth sb] | 218 | Escherichia coli | Mutation(s): 0  Gene Names: rpsB, b0169, JW0164 | ![]() |
UniProt | |||||
Find proteins for P0A7V0 (Escherichia coli (strain K12)) Explore P0A7V0  Go to UniProtKB:  P0A7V0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7V0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 40 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS3 | NA [auth sc] | 206 | Escherichia coli | Mutation(s): 0  Gene Names: rpsC, Z4685, ECs4179 | ![]() |
UniProt | |||||
Find proteins for P0A7V5 (Escherichia coli O157:H7) Explore P0A7V5  Go to UniProtKB:  P0A7V5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7V5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 41 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S4 | OA [auth sd] | 205 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsD, rpsD_2, A2F99_003133, A5U30_004530, A6592_25685, A8499_003310, A8502_004045, A8X14_004364, A9X72_02295, AAG43_004468... | ![]() |
UniProt | |||||
Find proteins for C3SR62 (Escherichia coli) Explore C3SR62  Go to UniProtKB:  C3SR62 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SR62 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 42 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS5 | PA [auth se] | 157 | Escherichia coli | Mutation(s): 0  Gene Names: rpsE, spc, b3303, JW3265 | ![]() |
UniProt | |||||
Find proteins for P0A7W1 (Escherichia coli (strain K12)) Explore P0A7W1  Go to UniProtKB:  P0A7W1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A7W1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 43 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S6, non-modified isoform | QA [auth sf] | 100 | Escherichia coli | Mutation(s): 0  Gene Names: rpsF, b4200, JW4158 | ![]() |
UniProt | |||||
Find proteins for P02358 (Escherichia coli (strain K12)) Explore P02358  Go to UniProtKB:  P02358 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02358 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 44 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S7 | RA [auth sg] | 151 | Escherichia coli | Mutation(s): 0  Gene Names: rpsG, b3341, JW3303 | ![]() |
UniProt | |||||
Find proteins for P02359 (Escherichia coli (strain K12)) Explore P02359  Go to UniProtKB:  P02359 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02359 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 45 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S8 | SA [auth sh] | 129 | Escherichia coli | Mutation(s): 0  Gene Names: rpsH, ECDEC2D_3910 | ![]() |
UniProt | |||||
Find proteins for A0A828U358 (Escherichia coli DEC2D) Explore A0A828U358  Go to UniProtKB:  A0A828U358 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A828U358 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 46 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS9 | TA [auth si] | 127 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsI, A5U30_002029, A6592_14035, A8499_002400, A8502_003025, A9X72_02640, AC065_15530, ACN81_18270, ACU57_14275, AM464_08780... | ![]() |
UniProt | |||||
Find proteins for C3SRY2 (Escherichia coli) Explore C3SRY2  Go to UniProtKB:  C3SRY2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SRY2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 47 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S10 | UA [auth sj] | 98 | Escherichia coli | Mutation(s): 0  Gene Names: rpsJ, NRG857_16455 | ![]() |
UniProt | |||||
Find proteins for A0A0H3EQD3 (Escherichia coli O83:H1 (strain NRG 857C / AIEC)) Explore A0A0H3EQD3  Go to UniProtKB:  A0A0H3EQD3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H3EQD3 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 48 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS11 | VA [auth sk] | 116 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsK, A5U30_004531, A6592_25690, A8499_003311, A8502_004044, A9X72_02290, AC065_15900, ACN81_25415, ACU57_21065, AM464_09115... | ![]() |
UniProt | |||||
Find proteins for C3SR57 (Escherichia coli) Explore C3SR57  Go to UniProtKB:  C3SR57 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SR57 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 49 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS12 | WA [auth sl] | 123 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsL, rpsL_2, A5U30_003889, A6592_18175, A8499_001308, A8502_001035, A9X72_02055, AC065_16140, ACN81_28395, ACU57_16335... | ![]() |
UniProt | |||||
Find proteins for C3SQR7 (Escherichia coli) Explore C3SQR7  Go to UniProtKB:  C3SQR7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SQR7 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 50 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S13 | XA [auth sm] | 114 | Escherichia coli | Mutation(s): 0  Gene Names: rpsM, A13A_03621 | ![]() |
UniProt | |||||
Find proteins for S1P5F8 (Escherichia coli KTE182) Explore S1P5F8  Go to UniProtKB:  S1P5F8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | S1P5F8 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 51 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS14 | YA [auth sn] | 100 | Escherichia coli | Mutation(s): 0  Gene Names: rpsN, EIMP300_17810 | ![]() |
UniProt | |||||
Find proteins for A0A8S0FJJ0 (Escherichia coli) Explore A0A8S0FJJ0  Go to UniProtKB:  A0A8S0FJJ0 | |||||
Entity Groups   | |||||
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UniProt Group | A0A8S0FJJ0 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 52 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS15 | ZA [auth so] | 88 | Escherichia coli | Mutation(s): 0  Gene Names: rpsO, secC, b3165, JW3134 | ![]() |
UniProt | |||||
Find proteins for P0ADZ4 (Escherichia coli (strain K12)) Explore P0ADZ4  Go to UniProtKB:  P0ADZ4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ADZ4 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 53 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS16 | AB [auth sp] | 82 | Escherichia coli | Mutation(s): 0  Gene Names: rpsP | ![]() |
UniProt | |||||
Find proteins for C3SYP2 (Escherichia coli) Explore C3SYP2  Go to UniProtKB:  C3SYP2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3SYP2 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 54 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein uS17 | BB [auth sq] | 80 | Escherichia coli | Mutation(s): 0  Gene Names: rpsQ, neaA, b3311, JW3273 | ![]() |
UniProt | |||||
Find proteins for P0AG63 (Escherichia coli (strain K12)) Explore P0AG63  Go to UniProtKB:  P0AG63 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AG63 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 55 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S18 | CB [auth sr] | 65 | Escherichia coli | Mutation(s): 0  Gene Names: rpsR, ECW_m4565 | ![]() |
UniProt | |||||
Find proteins for E0J6I2 (Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB 8666 / NRRL B-766 / W)) Explore E0J6I2  Go to UniProtKB:  E0J6I2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | E0J6I2 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 56 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S19 | DB [auth ss] | 79 | Escherichia coli | Mutation(s): 0  Gene Names: rpsS, ECKIH15140_04691 | ![]() |
UniProt | |||||
Find proteins for A0A7U9LGZ0 (Escherichia coli O145:H28) Explore A0A7U9LGZ0  Go to UniProtKB:  A0A7U9LGZ0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A7U9LGZ0 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 57 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S20 | EB [auth st] | 85 | Escherichia coli | Mutation(s): 0  Gene Names: rpsT | ![]() |
UniProt | |||||
Find proteins for C3TRH7 (Escherichia coli) Explore C3TRH7  Go to UniProtKB:  C3TRH7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3TRH7 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 58 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Small ribosomal subunit protein bS21 | FB [auth su] | 65 | Escherichia coli | Mutation(s): 0  Gene Names: rpsU, b3065, JW3037 | ![]() |
UniProt | |||||
Find proteins for P68679 (Escherichia coli (strain K12)) Explore P68679  Go to UniProtKB:  P68679 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68679 | ||||
Sequence AnnotationsExpand | |||||
|
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 33 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
mRNA | GA [auth M] | 6 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
|
Entity ID: 34 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
23S ribosomal RNA | HA [auth R1] | 2,903 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
|
Entity ID: 35 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
5S ribosomal RNA | IA [auth R2] | 119 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
|
Entity ID: 36 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
16S ribosomal RNA | JA [auth R3] | 1,538 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
|
Entity ID: 37 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
tRNA | KA [auth T] | 76 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP Query on ATP | BG [auth Y], CG [auth Y] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
ZN Query on ZN | JB [auth 36] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
MG Query on MG | AC [auth R1] AD [auth R1] AE [auth R1] AF [auth R3] AG [auth R3] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
NA Query on NA | DG [auth Y], EG [auth Y] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | -- |