6T6G

Bacteroides salyersiae GH164 beta-mannosidase in complex with noeuromycin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth DDD]	UNK_F_TYPE	e6t6gDDD3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
B [auth DDD]	Glyco_hydro_2_C	e6t6gDDD1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
B [auth DDD]	Glyco_hydro_42M	e6t6gDDD2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)
C [auth CCC]	UNK_F_TYPE	e6t6gCCC3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
C [auth CCC]	Glyco_hydro_2_C	e6t6gCCC1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
C [auth CCC]	Glyco_hydro_42M	e6t6gCCC2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)
D [auth BBB]	UNK_F_TYPE	e6t6gBBB3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
D [auth BBB]	Glyco_hydro_2_C	e6t6gBBB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
D [auth BBB]	Glyco_hydro_42M	e6t6gBBB2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)
F [auth EEE]	UNK_F_TYPE	e6t6gEEE3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
F [auth EEE]	Glyco_hydro_2_C	e6t6gEEE1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
F [auth EEE]	Glyco_hydro_42M	e6t6gEEE2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)
A [auth AAA]	UNK_F_TYPE	e6t6gAAA3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
A [auth AAA]	Glyco_hydro_2_C	e6t6gAAA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
A [auth AAA]	Glyco_hydro_42M	e6t6gAAA2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)
E [auth FFF]	UNK_F_TYPE	e6t6gFFF3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycosyl hydrolase domain (From Topology)	T: Glycosyl hydrolase domain	F: UNK_F_TYPE	ECOD (1.6)
E [auth FFF]	Glyco_hydro_2_C	e6t6gFFF1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_2_C	ECOD (1.6)
E [auth FFF]	Glyco_hydro_42M	e6t6gFFF2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Class I glutamine amidotransferase-like	F: Glyco_hydro_42M	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	PF08532	Beta-galactosidase trimerisation domain (Glyco_hydro_42M)	Beta-galactosidase trimerisation domain	This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain ...	This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	Glyco_hydro_42M domain-containing protein	hydrolase activity, acting on glycosyl bonds beta-galactosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity galactosidase activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	IPR029062	Class I glutamine amidotransferase-like	Homologous Superfamily
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	IPR003476	Glycoside hydrolase, family 42	Family
A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], A [auth AAA], B [auth DDD], C [auth CCC], D [auth BBB], E [auth FFF], F [auth EEE]	IPR013738	Beta-galactosidase trimerisation	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.