7UBX
Structure of a pore forming fragment of Clostridium difficile toxin A in complex with VHH AA6
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | V-set_8 | e7ubxD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
D [auth C] | V-set_8 | e7ubxC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth D], D [auth C] | Heavy Chain | IGHV5 | - | toxin a | SAbDab (2024-11-15) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR038383 | CGT/MARTX, cysteine protease (CPD) domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR024772 | TcdA/TcdB toxin, N-terminal helical domain | Domain |
A, C [auth B] | IPR020974 | CGT/MARTX, cysteine protease (CPD) domain | Domain |
A, C [auth B] | IPR024769 | TcdA/TcdB toxin, pore forming domain | Domain |
A, C [auth B] | IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily |
A, C [auth B] | IPR024770 | TcdA/TcdB toxin, catalytic glycosyltransferase domain | Domain |
A, C [auth B] | IPR018337 | Cell wall/choline-binding repeat | Repeat |