Experiment: 2YCY

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	2VT4	PDB ENTRY 2VT4

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		7.2		pH 7.2

Crystal Properties
Matthews coefficient	Solvent content
3.04	59.47

Symmetry
Space Group	C 1 2 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2007-07-01	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06SA		SLS	X06SA

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	3.15	47.5	83	0.14	6.5	2.5		12442		2	36.9

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	3.15	3.29	53		0.35	2	1.7

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	PDB ENTRY 2VT4	3.15	47.51	11841	601	100	0.25536	0.2535	0.29174	RANDOM	58.34

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-3.31		1.43	-4.23		8.57

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	25.273
r_dihedral_angle_3_deg	11.999
r_dihedral_angle_4_deg	8.439
r_scangle_it	8.024
r_scbond_it	4.985
r_dihedral_angle_1_deg	3.752
r_mcangle_it	3.335
r_mcbond_it	1.791
r_angle_refined_deg	1.002
r_angle_other_deg	0.849

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	25.273
r_dihedral_angle_3_deg	11.999
r_dihedral_angle_4_deg	8.439
r_scangle_it	8.024
r_scbond_it	4.985
r_dihedral_angle_1_deg	3.752
r_mcangle_it	3.335
r_mcbond_it	1.791
r_angle_refined_deg	1.002
r_angle_other_deg	0.849
r_mcbond_other	0.285
r_chiral_restr	0.048
r_bond_refined_d	0.011
r_bond_other_d	0.011
r_gen_planes_refined	0.003
r_gen_planes_other	0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded