1VGO
BNG: nonyl beta-D-glucopyranoside
BNG is a Ligand Of Interest in 1VGO designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1VGO_BNG_B_311 | 10% | 19% | 0.264 | 0.767 | 2.64 | 0.85 | 6 | 1 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_304 | 5% | 31% | 0.291 | 0.71 | 1.88 | 0.88 | 6 | - | 1 | 0 | 100% | 1 |
1VGO_BNG_A_301 | 5% | 38% | 0.293 | 0.711 | 1.64 | 0.82 | 5 | 1 | 1 | 0 | 100% | 1 |
1VGO_BNG_B_312 | 4% | 10% | 0.357 | 0.731 | 2.84 | 1.56 | 5 | 3 | 1 | 0 | 100% | 1 |
1VGO_BNG_B_310 | 2% | 18% | 0.33 | 0.64 | 2.81 | 0.81 | 6 | - | 0 | 0 | 100% | 1 |
1VGO_BNG_A_306 | 2% | 11% | 0.321 | 0.592 | 2.99 | 1.24 | 7 | 4 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_307 | 1% | 15% | 0.355 | 0.568 | 2.71 | 1.1 | 6 | 2 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_302 | 1% | 30% | 0.367 | 0.504 | 1.95 | 0.87 | 7 | - | 1 | 0 | 100% | 1 |
1VGO_BNG_A_305 | 1% | 24% | 0.417 | 0.542 | 2.01 | 1.1 | 7 | 2 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_308 | 0% | 12% | 0.515 | 0.569 | 2.89 | 1.26 | 6 | 4 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_309 | 0% | 38% | 0.578 | 0.497 | 1.59 | 0.84 | 5 | 1 | 0 | 0 | 100% | 1 |
1VGO_BNG_A_303 | 0% | 21% | 0.8 | 0.11 | 2.47 | 0.88 | 6 | 1 | 1 | 0 | 100% | 1 |
4RP9_BNG_A_503 | 84% | 70% | 0.091 | 0.952 | 0.38 | 0.76 | - | - | 3 | 0 | 100% | 1 |
4DVE_BNG_B_202 | 81% | 66% | 0.092 | 0.945 | 0.47 | 0.83 | - | 1 | 0 | 0 | 100% | 0.5 |
5B0W_BNG_F_304 | 74% | 49% | 0.088 | 0.917 | 1.25 | 0.73 | 3 | - | 2 | 0 | 100% | 1 |
4MES_BNG_B_201 | 72% | 51% | 0.128 | 0.953 | 0.83 | 1.05 | - | 2 | 5 | 0 | 100% | 1 |
4MUU_BNG_A_202 | 70% | 41% | 0.117 | 0.934 | 0.85 | 1.45 | - | 6 | 1 | 0 | 100% | 0.66 |