Ligand validation:2VK8

TPP: THIAMINE DIPHOSPHATE

TPP is a Ligand Of Interest in 2VK8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2VK8_TPP_C_1564	95%	25%	0.077	0.982	1.7	1.35	6	5	0	0	100%	0.9627
2VK8_TPP_B_1564	93%	24%	0.088	0.985	1.56	1.56	2	6	0	0	100%	0.9635
2VK8_TPP_A_1564	92%	25%	0.091	0.983	1.64	1.44	4	5	0	0	100%	0.9638
2VK8_TPP_D_1564	90%	24%	0.093	0.974	1.79	1.34	5	3	0	0	100%	0.965
1PVD_TPP_B_557	99%	14%	0.06	0.989	1.78	2.11	6	10	0	0	100%	1
2W93_TPP_C_600	99%	27%	0.058	0.986	1.52	1.42	4	5	6	0	100%	1
2VK1_TPP_D_600	97%	25%	0.068	0.983	1.54	1.49	6	4	0	0	100%	1
1QPB_TPP_B_600	96%	7%	0.08	0.987	3.09	1.73	8	9	2	0	100%	1
2AG1_TPP_C_622	100%	1%	0.019	0.998	6.24	1.97	6	9	1	0	100%	1
9BT4_TPP_C_302	100%	48%	0.018	0.998	1.1	0.92	2	2	1	0	100%	1
4KXW_TPP_A_1015	100%	39%	0.032	0.998	1.23	1.16	2	4	1	0	100%	1
4KGD_TPP_A_704	100%	22%	0.035	0.997	1.74	1.51	4	7	0	0	100%	0.97
4MPJ_TPP_A_604	100%	28%	0.031	0.991	1.34	1.53	3	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.