Ligand validation:3KQ4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3KQ4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3KQ4_NAG_B_2013	99%	33%	0.05	0.98	0.68	1.93	-	4	2	0	100%	0.9333
3KQ4_NAG_D_2013	98%	33%	0.05	0.974	0.63	1.99	-	5	2	0	100%	0.9333
3KQ4_NAG_F_2008	98%	55%	0.045	0.965	0.59	1.13	-	2	2	1	100%	0.9333
3KQ4_NAG_F_2013	94%	37%	0.07	0.97	0.67	1.78	1	4	2	0	100%	0.9333
3KQ4_NAG_D_2009	94%	62%	0.061	0.958	0.48	0.97	-	1	2	0	100%	0.9333
3KQ4_NAG_B_2007	93%	57%	0.086	0.982	0.56	1.08	-	2	0	0	100%	0.9333
3KQ4_NAG_B_2012	92%	28%	0.073	0.965	0.66	2.2	-	3	0	0	100%	0.9333
3KQ4_NAG_D_2012	89%	40%	0.078	0.958	0.6	1.7	-	4	0	0	100%	0.9333
3KQ4_NAG_F_2007	89%	57%	0.093	0.972	0.56	1.09	-	2	0	0	100%	0.9333
3KQ4_NAG_D_2007	89%	57%	0.082	0.959	0.54	1.09	-	2	0	0	100%	0.9333
3KQ4_NAG_F_2012	88%	33%	0.08	0.954	0.58	2.04	-	5	0	0	100%	0.9333
3KQ4_NAG_F_2001	86%	27%	0.081	0.948	0.99	1.9	1	4	0	1	100%	0.9333
3KQ4_NAG_B_2008	85%	55%	0.085	0.949	0.6	1.13	-	2	2	1	100%	0.9333
3KQ4_NAG_F_2009	85%	62%	0.063	0.926	0.48	0.97	-	1	3	0	100%	0.9333
3KQ4_NAG_B_2001	81%	28%	0.086	0.937	0.98	1.9	1	4	0	1	100%	0.9333
3KQ4_NAG_D_2008	80%	55%	0.085	0.934	0.59	1.14	-	2	2	1	100%	0.9333
3KQ4_NAG_D_2001	80%	28%	0.075	0.923	0.97	1.91	1	4	0	1	100%	0.9333
3KQ4_NAG_C_2001	74%	17%	0.144	0.975	1.14	2.45	2	7	6	1	100%	0.4947
3KQ4_NAG_B_2009	72%	61%	0.082	0.905	0.48	0.98	-	1	2	0	100%	0.9333
3KQ4_NAG_A_2001	69%	17%	0.152	0.966	1.15	2.44	2	7	6	1	100%	0.4947
3KQ4_NAG_E_2001	65%	16%	0.159	0.963	1.16	2.47	2	7	6	1	100%	0.4947
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_C_1002	100%	69%	0.022	0.994	0.55	0.65	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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3KQ4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3KQ4 designated by the RCSB