GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3SEA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3SEA_GDP_A_201 | 93% | 45% | 0.088 | 0.982 | 0.94 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6BSX_GDP_A_203 | 96% | 26% | 0.069 | 0.976 | 1.71 | 1.31 | 6 | 3 | 0 | 0 | 100% | 1 |
| 3T5G_GDP_A_201 | 91% | 52% | 0.087 | 0.973 | 0.87 | 0.98 | 1 | 3 | 0 | 0 | 100% | 1 |
| 7BTC_GDP_C_201 | 90% | 38% | 0.102 | 0.984 | 0.82 | 1.58 | - | 6 | 0 | 0 | 100% | 1 |
| 5YXH_GDP_A_201 | 84% | 44% | 0.107 | 0.969 | 0.97 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4O2R_GDP_B_201 | 83% | 44% | 0.105 | 0.965 | 0.96 | 1.19 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 4PZZ_GDP_A_201 | 100% | 54% | 0.035 | 0.989 | 0.92 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
