NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 3VDQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3VDQ_NAD_C_304 | 64% | 9% | 0.132 | 0.929 | 2.46 | 2.05 | 14 | 8 | 0 | 0 | 100% | 1 |
| 3VDQ_NAD_D_303 | 56% | 8% | 0.138 | 0.911 | 2.47 | 2.09 | 14 | 8 | 0 | 0 | 100% | 1 |
| 3VDQ_NAD_A_303 | 54% | 9% | 0.153 | 0.917 | 2.3 | 2.11 | 13 | 9 | 0 | 0 | 100% | 1 |
| 3VDQ_NAD_B_303 | 46% | 9% | 0.151 | 0.885 | 2.34 | 2.06 | 13 | 9 | 0 | 0 | 100% | 1 |
| 3W8F_NAD_A_301 | 100% | 29% | 0.046 | 0.987 | 1.46 | 1.38 | 8 | 8 | 1 | 0 | 100% | 1 |
| 5B4V_NAD_A_301 | 99% | 50% | 0.052 | 0.984 | 0.79 | 1.15 | - | 3 | 1 | 0 | 100% | 1 |
| 5B4T_NAD_A_301 | 99% | 48% | 0.057 | 0.986 | 0.84 | 1.15 | 1 | 4 | 2 | 0 | 100% | 1 |
| 5B4U_NAD_A_301 | 99% | 52% | 0.054 | 0.982 | 0.74 | 1.1 | 1 | 3 | 1 | 0 | 100% | 1 |
| 3W8D_NAD_A_301 | 97% | 22% | 0.058 | 0.975 | 1.65 | 1.6 | 10 | 5 | 1 | 0 | 100% | 1 |
| 3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
| 4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
| 3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
| 4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |
