Ligand validation:5FK8

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FK8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5FK8_NAG_A_1471	87%	57%	0.079	0.952	0.33	1.29	-	2	0	100%	0.9333
5FK8_NAG_B_1471	85%	71%	0.088	0.953	0.31	0.79	-	-	0	100%	0.9333
5FK8_NAG_A_1357	82%	70%	0.093	0.949	0.35	0.81	-	1	0	100%	0.9333
5FK8_NAG_A_1444	76%	64%	0.102	0.938	0.53	0.84	-	-	0	100%	0.9333
5FK8_NAG_A_1644	68%	71%	0.135	0.947	0.38	0.72	-	-	0	100%	0.9333
5FK8_NAG_B_1444	67%	57%	0.113	0.921	0.45	1.18	-	1	2	100%	0.9333
5FK8_NAG_A_1236	60%	67%	0.121	0.906	0.4	0.85	-	-	0	100%	0.9333
5FK8_NAG_B_1644	55%	67%	0.163	0.931	0.45	0.8	-	-	0	100%	0.9333
5FK8_NAG_A_1483	49%	67%	0.165	0.913	0.34	0.9	-	1	0	100%	0.9333
5FK8_NAG_B_1357	49%	68%	0.166	0.911	0.34	0.87	-	-	0	100%	0.9333
5FK8_NAG_B_1555	41%	71%	0.185	0.899	0.32	0.8	-	-	0	100%	0.9333
5FK8_NAG_B_1483	28%	65%	0.2	0.853	0.3	1.04	-	-	0	100%	0.9333
5FK8_NAG_A_1539	25%	55%	0.204	0.837	0.56	1.15	-	2	0	100%	0.9333
5FK8_NAG_A_1125	12%	49%	0.271	0.8	0.54	1.4	-	2	0	100%	0.9333
5FK8_NAG_A_1052	12%	61%	0.311	0.839	0.24	1.23	-	2	0	100%	0.9333
5FK8_NAG_A_1555	10%	58%	0.266	0.766	0.36	1.23	-	1	0	100%	0.9333
5FK8_NAG_B_1539	7%	56%	0.319	0.768	0.49	1.19	-	1	1	100%	0.9333
5FK8_NAG_A_1242	5%	66%	0.385	0.806	0.24	1.04	-	1	0	100%	0.9333
5FK8_NAG_A_1512	5%	52%	0.318	0.725	0.36	1.46	-	2	0	100%	0.9333
5FK8_NAG_A_1319	5%	67%	0.406	0.804	0.42	0.83	-	-	0	100%	0.9333
5FK8_NAG_B_1242	4%	56%	0.434	0.819	0.29	1.36	-	3	0	100%	0.9333
5FK8_NAG_B_1319	4%	69%	0.479	0.852	0.38	0.8	-	-	0	100%	0.9333
5FK8_NAG_A_1606	3%	39%	0.32	0.671	0.46	1.9	-	4	0	100%	0.9333
5FK8_NAG_B_1052	2%	71%	0.415	0.7	0.33	0.77	-	-	0	100%	0.9333
5FK8_NAG_A_1215	2%	37%	0.447	0.729	0.61	1.82	-	3	0	100%	0.9333
5FK8_NAG_B_1125	2%	58%	0.339	0.589	0.53	1.08	-	2	0	100%	0.9333
5FK8_NAG_B_1215	1%	58%	0.483	0.659	0.51	1.09	-	1	0	100%	0.9333
5O47_NAG_B_1444	91%	65%	0.078	0.964	0.4	0.94	-	1	1	100%	0.9333
6S82_NAG_A_1444	91%	48%	0.084	0.969	0.89	1.13	-	2	0	100%	0.9333
6S3Z_NAG_A_1357	91%	47%	0.088	0.973	0.75	1.28	-	2	0	100%	0.9333
5ANN_NAG_B_1471	89%	60%	0.084	0.962	0.56	0.97	-	1	0	100%	0.9333
5FK7_NAG_A_1471	88%	56%	0.079	0.955	0.29	1.36	-	4	1	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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5FK8

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FK8 designated by the RCSB