Ligand validation:5FKB

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FKB designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5FKB_NAG_A_1444	77%	65%	0.1	0.939	0.53	0.81	-	1	0	0	100%	0.9333
5FKB_NAG_A_1644	77%	69%	0.097	0.935	0.45	0.75	-	-	0	0	100%	0.9333
5FKB_NAG_A_1357	75%	59%	0.106	0.939	0.29	1.25	-	3	0	0	100%	0.9333
5FKB_NAG_B_1644	67%	71%	0.111	0.917	0.46	0.66	-	-	0	0	100%	0.9333
5FKB_NAG_B_1444	65%	54%	0.121	0.922	0.49	1.26	-	1	2	0	100%	0.9333
5FKB_NAG_B_1357	58%	68%	0.136	0.913	0.31	0.91	-	-	0	0	100%	0.9333
5FKB_NAG_A_1471	56%	55%	0.14	0.913	0.36	1.35	-	2	0	0	100%	0.9333
5FKB_NAG_A_1483	52%	68%	0.131	0.887	0.29	0.91	-	1	0	0	100%	0.9333
5FKB_NAG_A_1236	48%	66%	0.123	0.865	0.42	0.88	-	-	0	0	100%	0.9333
5FKB_NAG_B_1471	42%	70%	0.177	0.895	0.38	0.78	-	-	0	0	100%	0.9333
5FKB_NAG_B_1483	36%	69%	0.187	0.882	0.29	0.87	-	-	0	0	100%	0.9333
5FKB_NAG_A_1052	29%	64%	0.186	0.843	0.25	1.1	-	2	0	0	100%	0.9333
5FKB_NAG_A_1242	25%	63%	0.204	0.836	0.26	1.13	-	2	0	0	100%	0.9333
5FKB_NAG_B_1555	24%	68%	0.173	0.802	0.4	0.81	-	-	0	0	100%	0.9333
5FKB_NAG_A_1512	18%	61%	0.234	0.823	0.32	1.16	-	2	0	0	100%	0.9333
5FKB_NAG_A_1539	14%	54%	0.205	0.756	0.49	1.28	-	2	0	0	100%	0.9333
5FKB_NAG_A_1319	11%	68%	0.295	0.814	0.37	0.86	-	-	0	0	100%	0.9333
5FKB_NAG_B_1319	8%	64%	0.368	0.851	0.38	0.97	-	1	0	0	100%	0.9333
5FKB_NAG_B_1242	8%	56%	0.281	0.746	0.29	1.38	-	3	0	0	100%	0.9333
5FKB_NAG_A_1125	7%	60%	0.332	0.79	0.41	1.12	-	2	0	0	100%	0.9333
5FKB_NAG_A_1555	6%	58%	0.223	0.655	0.34	1.24	-	2	0	0	100%	0.9333
5FKB_NAG_B_1539	6%	60%	0.307	0.731	0.47	1.06	-	1	0	0	100%	0.9333
5FKB_NAG_A_1215	5%	34%	0.312	0.724	0.52	2.06	-	3	0	0	100%	0.9333
5FKB_NAG_B_1215	4%	61%	0.388	0.752	0.4	1.09	-	1	0	0	100%	0.9333
5FKB_NAG_B_1052	3%	67%	0.297	0.649	0.39	0.88	-	1	0	1	100%	0.9333
5FKB_NAG_A_1606	3%	35%	0.271	0.598	0.48	2.05	-	6	0	0	100%	0.9333
5FKB_NAG_B_1125	3%	62%	0.347	0.675	0.43	1.01	-	1	0	0	100%	0.9333
5O47_NAG_B_1444	91%	65%	0.078	0.964	0.4	0.94	-	1	1	0	100%	0.9333
6S82_NAG_A_1444	91%	48%	0.084	0.969	0.89	1.13	-	2	0	0	100%	0.9333
6S3Z_NAG_A_1357	91%	47%	0.088	0.973	0.75	1.28	-	2	0	0	100%	0.9333
5ANN_NAG_B_1471	89%	60%	0.084	0.962	0.56	0.97	-	1	0	0	100%	0.9333
5FK7_NAG_A_1471	88%	56%	0.079	0.955	0.29	1.36	-	4	1	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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5FKB

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FKB designated by the RCSB