CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 8ZD3 designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8ZD3_CDP_C_501 | 87% | 7% | 0.079 | 0.952 | 3.8 | 1.17 | 12 | 6 | 0 | 0 | 100% | 1 |
8ZD3_CDP_A_501 | 82% | 6% | 0.086 | 0.94 | 3.82 | 1.2 | 12 | 4 | 0 | 0 | 100% | 1 |
6SDK_CDP_C_301 | 100% | 5% | 0.043 | 0.987 | 3.72 | 1.58 | 12 | 6 | 0 | 0 | 100% | 1 |
3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
8VHP_CDP_D_809 | 98% | 52% | 0.051 | 0.975 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
3EE3_CDP_C_162 | 97% | 43% | 0.054 | 0.967 | 1.26 | 0.97 | 2 | 2 | 1 | 0 | 100% | 1 |
2VBU_CDP_A_1133 | 96% | 45% | 0.078 | 0.989 | 0.89 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |