Download MendeleyCrystal structure of a native chitinase from Aspergillus fumigatus YJ-407
Hu, H., Wang, G., Yang, H., Zhou, J., Mo, L., Yang, K., Jin, C., Jin, C., Rao, Z.To be published.
1WNO
Crystal structure of a native chitinase from Aspergillus fumigatus YJ-407
- PDB DOI: https://doi.org/10.2210/pdb1WNO/pdb
- Classification: HYDROLASE
- Organism(s): Aspergillus fumigatus
- Mutation(s): No
- Deposited: 2004-08-07 Released: 2005-03-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.245
- R-Value Work: 0.217
- R-Value Observed: 0.230
This is version 2.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Chitinase | 395 | Aspergillus fumigatus | Mutation(s): 0 EC: 3.2.1.14 |  | |
UniProt | |||||
Find proteins for Q873X9 (Aspergillus fumigatus) Explore Q873X9 Go to UniProtKB: Q873X9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q873X9 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | H [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| NDG Query on NDG | C [auth A] | 2-acetamido-2-deoxy-alpha-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-PVFLNQBWSA-N |  | ||
| SO4 Query on SO4 | D [auth A] E [auth A] F [auth A] I [auth B] J [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| MG Query on MG | G [auth A], L [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.245
- R-Value Work: 0.217
- R-Value Observed: 0.230
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 95.678 | α = 90 |
| b = 100.461 | β = 90 |
| c = 134.295 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| CNS | refinement |
| CNS | phasing |
Entry History
Deposition Data
Revision History (Full details and data files)
- Version 1.0: 2005-03-15
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Structure summary - Version 2.1: 2024-03-13
Changes: Data collection, Database references, Structure summary
