Download MendeleyCrystal Structure of Intracellular B30.2 Domain of VpBTN3 in Complex with DMASPP
Yang, Y.Y., Yi, S.M., Zhang, M.T., Chen, C.-C., Guo, R.-T.To be published.
9LN2 | pdb_00009ln2
Crystal Structure of Intracellular B30.2 Domain of VpBTN3 in Complex with DMASPP
- PDB DOI: https://doi.org/10.2210/pdb9LN2/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Vicugna pacos
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2025-01-20 Released: 2025-05-14
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.77 ?
- R-Value Free: 0.202 (Depositor), 0.209 (DCC)
- R-Value Work: 0.157 (Depositor), 0.171 (DCC)
- R-Value Observed: 0.159 (Depositor)
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Butyrophylin 3 | 242 | Vicugna pacos | Mutation(s): 0 Gene Names: Btn3 |  | |
UniProt | |||||
Find proteins for A0A345DF50 (Vicugna pacos) Explore A0A345DF50 Go to UniProtKB: A0A345DF50 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A345DF50 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| DST (Subject of Investigation/LOI) Query on DST | G [auth B] | DIMETHYLALLYL S-THIOLODIPHOSPHATE C5 H12 O6 P2 S ZWFWSISPSBLNGO-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | C [auth A], D [auth A], E [auth A], F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| EDO Query on EDO | H [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.77 ?
- R-Value Free: 0.202 (Depositor), 0.209 (DCC)
- R-Value Work: 0.157 (Depositor), 0.171 (DCC)
- R-Value Observed: 0.159 (Depositor)
Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 43.858 | ¦Á = 90 |
| b = 67.988 | ¦Â = 90 |
| c = 134.307 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SAINT | data reduction |
| SAINT | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-05-14 Deposition Author(s): Yang, Y.Y., Yi, S.M., Zhang, M.T., Chen, C.-C., Guo, R.-T.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | 82271887 |
Revision History (Full details and data files)
- Version 1.0: 2025-05-14
Type: Initial release
