PNY: (2R)-2,4-dihydroxy-3,3-dimethyl-N-{3-oxo-3-[(2-sulfanylethyl)amino]propyl}butanamide
PNY is a Ligand Of Interest in 3ND7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3ND7_PNY_C_503 | 66% | 40% | 0.132 | 0.938 | 0.71 | 1.6 | - | 4 | 4 | 0 | 100% | 1 |
| 3ND7_PNY_D_504 | 56% | 32% | 0.144 | 0.917 | 1.59 | 1.14 | 3 | 2 | 1 | 0 | 100% | 1 |
| 3ND7_PNY_B_502 | 55% | 31% | 0.134 | 0.9 | 1.04 | 1.7 | 1 | 3 | 4 | 0 | 100% | 1 |
| 3ND7_PNY_E_505 | 37% | 31% | 0.172 | 0.87 | 1.14 | 1.58 | 2 | 4 | 1 | 0 | 100% | 1 |
| 3ND7_PNY_F_506 | 33% | 38% | 0.184 | 0.864 | 1.01 | 1.41 | 1 | 4 | 0 | 0 | 100% | 1 |
| 3ND7_PNY_A_501 | 25% | 11% | 0.213 | 0.85 | 2.98 | 1.29 | 2 | 1 | 6 | 0 | 100% | 1 |
| 8OOM_PNY_A_301 | 23% | 19% | 0.167 | 0.79 | 2.03 | 1.47 | 3 | 3 | 0 | 0 | 100% | 1 |
| 2XZ1_PNY_C_1138 | 6% | 52% | 0.38 | 0.915 | 0.75 | 1.08 | - | 1 | 0 | 0 | 50% | 1 |
