GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 9C1B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
9C1B_GDP_A_302 | 89% | 47% | 0.076 | 0.956 | 0.98 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
9C1B_GDP_B_302 | 88% | 47% | 0.08 | 0.955 | 0.98 | 1.08 | 1 | 2 | 2 | 0 | 100% | 1 |
9C1B_GDP_D_302 | 86% | 46% | 0.083 | 0.951 | 0.98 | 1.09 | 1 | 2 | 0 | 0 | 100% | 1 |
9C1B_GDP_C_302 | 83% | 47% | 0.087 | 0.946 | 0.97 | 1.06 | 1 | 2 | 0 | 0 | 100% | 1 |
9C1A_GDP_A_202 | 100% | 42% | 0.043 | 0.984 | 0.98 | 1.26 | 2 | 4 | 0 | 0 | 100% | 1 |
3KKQ_GDP_A_179 | 98% | 56% | 0.064 | 0.984 | 0.92 | 0.8 | 1 | - | 0 | 0 | 100% | 1 |
1X1R_GDP_A_1179 | 95% | 46% | 0.078 | 0.983 | 1.14 | 0.97 | 1 | 1 | 0 | 0 | 100% | 1 |
1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |