High Resolution Crystal Structure of H-2Kb/VSV8
Rudolph, M.G., Wilson, I.A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
H-2 class I histocompatibility antigen, K-B alpha chain | 274 | Mus musculus | Mutation(s): 0 | ![]() | |
UniProt | |||||
Find proteins for P01901 (Mus musculus) Explore P01901 Go to UniProtKB: P01901 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01901 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P01901-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
beta-2-microglobulin | 99 | Mus musculus | Mutation(s): 0 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01887 (Mus musculus) Explore P01887 Go to UniProtKB: P01887 | |||||
IMPC: MGI:88127 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01887 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MPD Query on MPD | G [auth A], H [auth B], I [auth B] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
PO4 Query on PO4 | E [auth A], F [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( ? ) | Angle ( ? ) |
---|---|
a = 136.287 | α = 90 |
b = 88.342 | β = 90 |
c = 45.322 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
SCALEPACK | data scaling |
CNS | refinement |
DENZO | data reduction |
CNS | phasing |