6JUO
MsDpo4-DNA complex 4
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth F] | IMS_HHH | e6juoF1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: IMS_HHH | ECOD (1.6) |
D [auth F] | IMS_C | e6juoF2 | A: a+b two layers | X: Reverse ferredoxin | H: Lesion bypass DNA polymerase (Y-family), little finger domain (From Topology) | T: Lesion bypass DNA polymerase (Y-family), little finger domain | F: IMS_C | ECOD (1.6) |
D [auth F] | IMS | e6juoF4 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: IMS | ECOD (1.6) |
D [auth F] | IMS_1 | e6juoF3 | A: a+b three layers | X: Hypothetical protein Ta1206-like (From Topology) | H: Hypothetical protein Ta1206-like (From Topology) | T: Hypothetical protein Ta1206-like | F: IMS_1 | ECOD (1.6) |
A | IMS_HHH | e6juoA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: IMS_HHH | ECOD (1.6) |
A | IMS_C | e6juoA3 | A: a+b two layers | X: Reverse ferredoxin | H: Lesion bypass DNA polymerase (Y-family), little finger domain (From Topology) | T: Lesion bypass DNA polymerase (Y-family), little finger domain | F: IMS_C | ECOD (1.6) |
A | IMS | e6juoA4 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: IMS | ECOD (1.6) |
A | IMS_1 | e6juoA2 | A: a+b three layers | X: Hypothetical protein Ta1206-like (From Topology) | H: Hypothetical protein Ta1206-like (From Topology) | T: Hypothetical protein Ta1206-like | F: IMS_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth F] | PF00817 | impB/mucB/samB family (IMS) | impB/mucB/samB family | - | Family |
A, D [auth F] | PF21999 | DNA polymerase-iota, thumb domain (IMS_HHH_1) | DNA polymerase-iota, thumb domain | This is the thumb domain found in DNA polymerase iota and related proteins. This domain makes contacts with the minor groove of DNA. | Domain |
A, D [auth F] | PF11799 | impB/mucB/samB family C-terminal domain (IMS_C) | impB/mucB/samB family C-terminal domain | These proteins are involved in UV protection (Swiss). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth F] | IPR001126 | UmuC domain | Domain |
A, D [auth F] | IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |
A, D [auth F] | IPR036775 | DNA polymerase, Y-family, little finger domain superfamily | Homologous Superfamily |
A, D [auth F] | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily |
A, D [auth F] | IPR050116 | DNA polymerase type-Y | Family |
A, D [auth F] | IPR022880 | DNA polymerase IV | Family |
A, D [auth F] | IPR017961 | DNA polymerase, Y-family, little finger domain | Domain |
A, D [auth F] | IPR053848 | DNA polymerase IV/DNA polymerase iota-like, thumb domain | Domain |