Experiment: 5CZ5

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1RYP

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	6.8	293	20 mM MgAC2, 13% MPD, 0.1 M MES

Crystal Properties
Matthews coefficient	Solvent content
3.67	66.52

Symmetry
Space Group	P 1 21 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	PSI PILATUS 6M		2014-07-19	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06SA	1.0	SLS	X06SA

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.8	30	97.9	0.067	15.1	3.1	264147	258600

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.8	2.9	97.2		0.457	2.7

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1RYP	2.8	15	245669	12930	98.04	0.2022	0.20117	0.22163	RANDOM	66.137

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
4.11		-0.27	-7.92		2.88

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.902
r_sphericity_free	31.738
r_dihedral_angle_3_deg	13.93
r_dihedral_angle_4_deg	13.319
r_sphericity_bonded	5.34
r_dihedral_angle_1_deg	5.001
r_long_range_B_refined	2.891
r_long_range_B_other	2.883
r_mcangle_it	2.565
r_mcangle_other	2.565

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.902
r_sphericity_free	31.738
r_dihedral_angle_3_deg	13.93
r_dihedral_angle_4_deg	13.319
r_sphericity_bonded	5.34
r_dihedral_angle_1_deg	5.001
r_long_range_B_refined	2.891
r_long_range_B_other	2.883
r_mcangle_it	2.565
r_mcangle_other	2.565
r_scangle_other	2.332
r_mcbond_it	2.001
r_mcbond_other	2.001
r_scbond_it	1.96
r_scbond_other	1.959
r_rigid_bond_restr	0.945
r_angle_refined_deg	0.861
r_angle_other_deg	0.737
r_chiral_restr	0.049
r_bond_refined_d	0.005
r_gen_planes_refined	0.003
r_bond_other_d	0.002
r_gen_planes_other	0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it