Experiment: 5FGF

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1RYP

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	6.8	293	20 mM MgAC2, 13% MPD, 0.1 M MES

Crystal Properties
Matthews coefficient	Solvent content
3.67	66.52

Symmetry
Space Group	P 1 21 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	PSI PILATUS 6M		2015-12-10	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06SA	1.0	SLS	X06SA

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.6	40	98.6	0.07	12.7	3.8		322961

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.6	2.7	99.2		0.455	3.1

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1RYP	2.6	15	306812	16148	98.67	0.19336	0.19228	0.21376	RANDOM	62.744

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
3.21		-0.71	-5.05		1.57

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.051
r_sphericity_free	33.746
r_sphericity_bonded	14.601
r_dihedral_angle_3_deg	14.044
r_dihedral_angle_4_deg	13.387
r_dihedral_angle_1_deg	4.877
r_long_range_B_refined	3.311
r_long_range_B_other	3.271
r_mcangle_it	2.775
r_mcangle_other	2.775

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.051
r_sphericity_free	33.746
r_sphericity_bonded	14.601
r_dihedral_angle_3_deg	14.044
r_dihedral_angle_4_deg	13.387
r_dihedral_angle_1_deg	4.877
r_long_range_B_refined	3.311
r_long_range_B_other	3.271
r_mcangle_it	2.775
r_mcangle_other	2.775
r_scangle_other	2.506
r_mcbond_it	2.108
r_mcbond_other	2.108
r_scbond_it	2.07
r_scbond_other	2.07
r_rigid_bond_restr	1.253
r_angle_refined_deg	0.906
r_angle_other_deg	0.758
r_chiral_restr	0.049
r_bond_refined_d	0.005
r_gen_planes_refined	0.003
r_bond_other_d	0.002
r_gen_planes_other	0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it