XMP: XANTHOSINE-5'-MONOPHOSPHATE
XMP is a Ligand Of Interest in 2YWC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YWC_XMP_A_701 | 65% | 13% | 0.143 | 0.944 | 1.32 | 2.63 | 2 | 7 | 1 | 0 | 100% | 1 |
2YWC_XMP_B_702 | 46% | 11% | 0.19 | 0.927 | 1.38 | 2.73 | 3 | 6 | 3 | 0 | 100% | 1 |
2YWC_XMP_D_704 | 39% | 12% | 0.196 | 0.901 | 1.31 | 2.76 | 2 | 7 | 2 | 0 | 100% | 1 |
2YWC_XMP_C_703 | 35% | 12% | 0.193 | 0.879 | 1.33 | 2.74 | 2 | 8 | 4 | 0 | 100% | 1 |
4ZQM_XMP_A_601 | 98% | 17% | 0.052 | 0.978 | 1.12 | 2.47 | 2 | 4 | 1 | 0 | 100% | 1 |
8P37_XMP_A_401 | 98% | 22% | 0.063 | 0.984 | 1.42 | 1.84 | 3 | 4 | 2 | 0 | 100% | 1 |
4X3Z_XMP_A_500 | 98% | 15% | 0.061 | 0.981 | 1.48 | 2.31 | 3 | 5 | 3 | 0 | 100% | 1 |
3BPW_XMP_A_1000 | 96% | 11% | 0.062 | 0.973 | 1.12 | 3 | 1 | 10 | 1 | 0 | 100% | 1 |
2VXO_XMP_B_1694 | 96% | 14% | 0.076 | 0.987 | 1.01 | 2.78 | 2 | 7 | 1 | 0 | 100% | 1 |