GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4B8Z designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4B8Z_GDP_D_901 | 56% | 63% | 0.176 | 0.947 | 0.81 | 0.61 | 1 | - | 0 | 0 | 100% | 1 |
| 4B8Z_GDP_B_901 | 55% | 62% | 0.186 | 0.957 | 0.91 | 0.55 | 2 | - | 0 | 0 | 100% | 1 |
| 4B8Z_GDP_A_901 | 48% | 64% | 0.189 | 0.933 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
| 4B8Z_GDP_C_901 | 48% | 61% | 0.2 | 0.943 | 0.95 | 0.54 | 2 | - | 0 | 0 | 100% | 1 |
| 4B8W_GDP_A_901 | 54% | 24% | 0.164 | 0.929 | 0.84 | 2.26 | 1 | 2 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
