UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4D0T designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4D0T_UDP_C_1571 | 88% | 32% | 0.107 | 0.984 | 1.17 | 1.52 | 3 | 8 | 0 | 0 | 100% | 1 |
| 6E7I_UDP_A_601 | 99% | 27% | 0.053 | 0.987 | 1.4 | 1.55 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5AJP_UDP_A_1570 | 98% | 36% | 0.056 | 0.982 | 1.01 | 1.49 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5NDF_UDP_A_602 | 97% | 33% | 0.071 | 0.984 | 1.07 | 1.58 | 1 | 7 | 0 | 0 | 100% | 1 |
| 2FFU_UDP_A_601 | 96% | 8% | 0.059 | 0.97 | 2.57 | 2.07 | 6 | 10 | 0 | 0 | 100% | 1 |
| 5FV9_UDP_A_1570 | 77% | 20% | 0.126 | 0.967 | 1.52 | 1.86 | 4 | 9 | 3 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
