Ligand validation:4DKR

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4DKR designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
4DKR_NAG_A_503	87%	66%	0.083	0.954	0.48	0.83	-	-	0	100%	0.9333
4DKR_NAG_C_503	80%	62%	0.113	0.962	0.47	0.98	-	1	0	100%	0.9333
4DKR_NAG_A_509	74%	69%	0.105	0.936	0.55	0.63	-	-	0	100%	0.9333
4DKR_NAG_A_501	70%	70%	0.103	0.919	0.55	0.6	-	-	0	100%	0.9333
4DKR_NAG_A_505	62%	68%	0.118	0.908	0.52	0.71	-	-	0	100%	0.9333
4DKR_NAG_A_504	56%	70%	0.165	0.939	0.5	0.64	-	-	0	100%	0.9333
4DKR_NAG_C_502	49%	65%	0.151	0.896	0.5	0.85	-	1	0	100%	0.9333
4DKR_NAG_A_506	48%	66%	0.189	0.933	0.51	0.79	-	-	0	100%	0.9333
4DKR_NAG_C_509	48%	69%	0.148	0.89	0.52	0.68	-	-	0	100%	0.9333
4DKR_NAG_C_505	40%	66%	0.163	0.874	0.49	0.8	-	-	0	100%	0.9333
4DKR_NAG_C_506	39%	71%	0.153	0.859	0.53	0.58	-	-	0	100%	0.9333
4DKR_NAG_A_508	30%	50%	0.174	0.838	0.53	1.36	-	2	1	100%	0.9333
4DKR_NAG_A_507	24%	67%	0.159	0.785	0.49	0.77	-	-	0	100%	0.9333
4DKR_NAG_C_507	12%	67%	0.308	0.835	0.53	0.74	-	-	0	100%	0.9333
4DKR_NAG_C_511	11%	70%	0.23	0.75	0.51	0.65	-	-	0	100%	0.9333
4DKR_NAG_C_510	8%	70%	0.315	0.793	0.53	0.63	-	-	0	100%	0.9333
4DKR_NAG_C_504	5%	69%	0.316	0.737	0.52	0.68	-	-	0	100%	0.9333
4DKR_NAG_C_501	1%	75%	0.551	0.762	0.26	0.72	-	-	0	100%	0.9333
4DKR_NAG_A_502	1%	68%	0.401	0.57	0.51	0.7	-	-	0	100%	0.9333
4DKR_NAG_A_511	1%	61%	0.378	0.531	0.52	0.95	-	1	0	100%	0.9333
4DKR_NAG_A_510	0%	72%	0.56	0.513	0.26	0.79	-	-	0	100%	0.9333
4DKR_NAG_C_508	0%	67%	0.847	0.309	0.55	0.7	-	-	0	100%	0.9333
4YFL_NAG_E_507	98%	70%	0.061	0.985	0.48	0.66	-	-	0	100%	0.9333
3SE8_NAG_G_734	94%	68%	0.063	0.961	0.56	0.68	-	-	0	100%	0.9333
4LSQ_NAG_G_503	93%	57%	0.065	0.96	0.58	1.07	-	1	0	100%	0.9333
7SX7_NAG_A_508	92%	71%	0.073	0.964	0.28	0.84	-	1	0	100%	0.9333
4DVW_NAG_A_503	91%	65%	0.087	0.973	0.51	0.81	-	-	1	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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4DKR

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4DKR designated by the RCSB