NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4GDI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4GDI_NAG_D_504 | 34% | 49% | 0.183 | 0.864 | 0.54 | 1.39 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_E_505 | 27% | 61% | 0.204 | 0.85 | 0.63 | 0.86 | - | - | 1 | 0 | 100% | 0.9333 |
4GDI_NAG_F_505 | 25% | 62% | 0.217 | 0.853 | 0.58 | 0.85 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_B_507 | 22% | 58% | 0.219 | 0.838 | 0.64 | 0.96 | - | - | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_A_507 | 15% | 55% | 0.255 | 0.815 | 0.42 | 1.31 | - | 3 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_A_508 | 7% | 58% | 0.27 | 0.73 | 0.57 | 1.04 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_B_508 | 7% | 64% | 0.321 | 0.769 | 0.54 | 0.84 | - | - | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_C_505 | 6% | 63% | 0.287 | 0.731 | 0.57 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_A_506 | 6% | 57% | 0.294 | 0.732 | 0.52 | 1.1 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_C_506 | 6% | 53% | 0.306 | 0.74 | 0.66 | 1.15 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_E_508 | 4% | 50% | 0.295 | 0.679 | 0.68 | 1.23 | - | 2 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_F_506 | 4% | 62% | 0.361 | 0.739 | 0.52 | 0.92 | - | 1 | 0 | 0 | 100% | 0.9333 |
4GDI_NAG_D_505 | 3% | 54% | 0.334 | 0.683 | 0.59 | 1.18 | - | 2 | 0 | 0 | 100% | 0.9333 |
4GEZ_NAG_C_502 | 100% | 57% | 0.027 | 0.988 | 0.6 | 1.03 | - | 1 | 1 | 0 | 100% | 0.9333 |
4FVK_NAG_B_505 | 46% | 50% | 0.17 | 0.906 | 0.36 | 1.55 | - | 5 | 0 | 0 | 100% | 0.9333 |
4GDJ_NAG_A_506 | 20% | 69% | 0.21 | 0.809 | 0.46 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |