SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4PV1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4PV1_SQD_D_202 | 30% | 39% | 0.163 | 0.823 | 0.96 | 1.41 | 3 | 9 | 1 | 0 | 100% | 0.4444 |
| 2E76_SQD_D_201 | 11% | 1% | 0.274 | 0.787 | 2.93 | 5.06 | 25 | 31 | 9 | 3 | 100% | 1 |
| 2E75_SQD_D_201 | 7% | 1% | 0.411 | 0.874 | 2.69 | 4.75 | 25 | 35 | 10 | 3 | 100% | 1 |
| 2E74_SQD_D_201 | 7% | 1% | 0.306 | 0.758 | 3.24 | 4.54 | 23 | 23 | 0 | 1 | 100% | 1 |
| 4H0L_SQD_D_201 | 1% | 4% | 0.549 | 0.739 | 3.21 | 2.46 | 17 | 18 | 17 | 3 | 98% | 0.9815 |
| 4H13_SQD_D_201 | 0% | 5% | 0.613 | 0.61 | 3.21 | 2.21 | 17 | 13 | 2 | 2 | 98% | 0.9815 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
