PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 4Y0H designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4Y0H_PLP_A_502 | 93% | 9% | 0.089 | 0.985 | 2.25 | 2.15 | 4 | 7 | 0 | 0 | 100% | 0.9375 |
4Y0H_PLP_C_503 | 93% | 8% | 0.09 | 0.983 | 2.92 | 1.72 | 4 | 6 | 0 | 0 | 100% | 0.9375 |
4Y0H_PLP_B_502 | 86% | 9% | 0.102 | 0.97 | 3 | 1.44 | 5 | 3 | 0 | 0 | 100% | 0.9375 |
4Y0H_PLP_D_501 | 85% | 10% | 0.114 | 0.98 | 2.12 | 2.14 | 4 | 6 | 0 | 0 | 100% | 0.9375 |
1OHY_PLP_C_600 | 93% | 33% | 0.08 | 0.986 | 1.03 | 1.59 | 1 | 3 | 2 | 0 | 94% | 0.9375 |
1OHV_PLP_B_600 | 87% | 42% | 0.102 | 0.976 | 0.79 | 1.45 | - | 3 | 0 | 0 | 100% | 0.9375 |
1OHW_PLP_D_600 | 83% | 47% | 0.105 | 0.976 | 0.84 | 1.18 | - | 1 | 0 | 0 | 94% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |