Ligand validation:5FMD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FMD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5FMD_NAG_A_1357	81%	55%	0.095	0.948	0.37	1.36	-	3	0	100%	0.9333
5FMD_NAG_B_1471	78%	69%	0.094	0.937	0.35	0.83	-	-	0	100%	0.9333
5FMD_NAG_A_1471	76%	60%	0.093	0.929	0.33	1.19	-	2	0	100%	0.9333
5FMD_NAG_A_1444	76%	67%	0.094	0.928	0.48	0.77	-	-	0	100%	0.9333
5FMD_NAG_B_1444	74%	61%	0.1	0.93	0.53	0.94	-	1	2	100%	0.9333
5FMD_NAG_A_1644	70%	70%	0.115	0.933	0.44	0.71	-	-	0	100%	0.9333
5FMD_NAG_B_1357	60%	70%	0.132	0.918	0.32	0.81	-	-	0	100%	0.9333
5FMD_NAG_B_1644	57%	71%	0.131	0.906	0.4	0.71	-	-	0	100%	0.9333
5FMD_NAG_A_1236	40%	68%	0.147	0.856	0.39	0.84	-	-	0	100%	0.9333
5FMD_NAG_A_1483	38%	73%	0.176	0.878	0.32	0.7	-	1	0	100%	0.9333
5FMD_NAG_B_1555	31%	69%	0.184	0.85	0.38	0.82	-	-	0	100%	0.9333
5FMD_NAG_B_1483	20%	68%	0.251	0.853	0.28	0.94	-	1	0	100%	0.9333
5FMD_NAG_A_1539	17%	56%	0.23	0.807	0.52	1.16	-	2	0	100%	0.9333
5FMD_NAG_B_1539	7%	62%	0.308	0.766	0.45	0.98	-	1	1	100%	0.9333
5FMD_NAG_A_1319	6%	70%	0.387	0.832	0.33	0.81	-	-	0	100%	0.9333
5FMD_NAG_A_1555	6%	59%	0.288	0.723	0.32	1.24	-	3	0	100%	0.9333
5FMD_NAG_A_1052	5%	63%	0.357	0.77	0.28	1.13	-	2	0	100%	0.9333
5FMD_NAG_A_1125	4%	56%	0.347	0.721	0.44	1.24	-	1	0	100%	0.9333
5FMD_NAG_A_1242	4%	66%	0.382	0.747	0.26	1.03	-	1	0	100%	0.9333
5FMD_NAG_A_1512	3%	55%	0.342	0.676	0.35	1.36	-	4	0	100%	0.9333
5FMD_NAG_B_1319	3%	67%	0.481	0.817	0.43	0.82	-	-	0	100%	0.9333
5FMD_NAG_B_1052	3%	70%	0.398	0.726	0.33	0.81	-	-	0	100%	0.9333
5FMD_NAG_A_1606	3%	36%	0.334	0.655	0.48	1.99	-	6	0	100%	0.9333
5FMD_NAG_B_1242	2%	59%	0.455	0.695	0.29	1.25	-	3	0	100%	0.9333
5FMD_NAG_A_1215	1%	43%	0.48	0.675	0.54	1.62	-	2	0	100%	0.9333
5FMD_NAG_B_1215	1%	59%	0.491	0.629	0.45	1.09	-	1	0	100%	0.9333
5FMD_NAG_B_1125	1%	60%	0.421	0.531	0.47	1.06	-	1	0	100%	0.9333
5O47_NAG_B_1444	91%	65%	0.078	0.964	0.4	0.94	-	1	1	100%	0.9333
6S82_NAG_A_1444	91%	48%	0.084	0.969	0.89	1.13	-	2	0	100%	0.9333
6S3Z_NAG_A_1357	91%	47%	0.088	0.973	0.75	1.28	-	2	0	100%	0.9333
5ANN_NAG_B_1471	89%	60%	0.084	0.962	0.56	0.97	-	1	0	100%	0.9333
5FK7_NAG_A_1471	88%	56%	0.079	0.955	0.29	1.36	-	4	1	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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5FMD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5FMD designated by the RCSB