Ligand validation:5JVY

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5JVY designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JVY_NAG_B_602	41%	79%	0.211	0.927	0.37	0.49	-	-	0	0	100%	0.9333
5JVY_NAG_A_606	41%	86%	0.202	0.917	0.28	0.43	-	-	0	0	100%	0.9333
5JVY_NAG_B_606	34%	85%	0.225	0.911	0.32	0.41	-	-	0	0	100%	0.9333
5JVY_NAG_A_603	26%	87%	0.257	0.898	0.26	0.44	-	-	0	0	100%	0.9333
6OFY_NAG_B_602	88%	26%	0.085	0.962	1.43	1.55	2	6	0	0	100%	0.9333
3RR3_NAG_B_671	83%	48%	0.081	0.951	0.68	1.31	-	2	4	0	93%	0.9333
6BL4_NAG_C_705	80%	83%	0.107	0.957	0.32	0.46	-	-	0	0	100%	0.9333
3Q7D_NAG_B_671	70%	40%	0.112	0.942	0.8	1.53	1	4	5	0	93%	0.9333
4OTJ_NAG_C_704	68%	83%	0.095	0.905	0.35	0.43	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.