Ligand validation:5L8R

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5L8R designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5L8R_CLA_A_839	92%	25%	0.078	0.969	1.32	1.73	6	11	7	1	100%	1
5L8R_CLA_A_841	91%	24%	0.085	0.971	1.35	1.76	7	12	8	1	100%	1
5L8R_CLA_B_814	88%	23%	0.097	0.971	1.33	1.82	8	13	6	1	100%	1
5L8R_CLA_A_802	87%	23%	0.094	0.965	1.29	1.86	7	18	17	1	100%	1
5L8R_CLA_J_1101	86%	21%	0.09	0.96	1.31	1.96	6	18	15	1	100%	1
5L8R_CLA_B_819	86%	23%	0.102	0.971	1.3	1.86	6	14	17	1	100%	1
5L8R_CLA_B_836	84%	24%	0.09	0.953	1.32	1.76	6	12	5	1	100%	1
5L8R_CLA_F_302	84%	23%	0.098	0.961	1.34	1.84	7	15	7	1	100%	1
5L8R_CLA_B_824	84%	21%	0.102	0.964	1.32	1.97	7	14	7	1	100%	1
5L8R_CLA_B_838	84%	23%	0.096	0.957	1.34	1.81	7	13	9	1	100%	1
5L8R_CLA_A_830	83%	23%	0.098	0.958	1.31	1.85	7	15	12	1	100%	1
5L8R_CLA_A_806	83%	23%	0.099	0.959	1.31	1.83	6	13	10	1	100%	1
5L8R_CLA_A_808	83%	22%	0.1	0.959	1.3	1.9	5	12	11	1	100%	1
5L8R_CLA_A_803	83%	23%	0.099	0.957	1.31	1.87	7	13	6	1	100%	1
5L8R_CLA_B_832	83%	20%	0.084	0.961	1.38	1.98	6	15	8	1	89%	1
5L8R_CLA_A_840	83%	23%	0.101	0.958	1.28	1.85	6	14	6	1	100%	1
5L8R_CLA_2_507	82%	22%	0.105	0.961	1.32	1.92	5	14	10	1	100%	1
5L8R_CLA_B_809	82%	24%	0.106	0.962	1.34	1.75	8	12	9	1	100%	1
5L8R_CLA_B_826	81%	23%	0.105	0.958	1.34	1.82	8	13	6	1	100%	1
5L8R_CLA_2_506	81%	22%	0.106	0.957	1.33	1.92	8	14	6	1	100%	1
5L8R_CLA_B_804	80%	21%	0.103	0.952	1.34	1.94	6	15	6	1	100%	1
5L8R_CLA_A_809	80%	23%	0.106	0.954	1.3	1.87	6	15	10	1	100%	1
5L8R_CLA_B_807	79%	23%	0.105	0.952	1.32	1.82	6	12	4	1	100%	1
5L8R_CLA_A_825	79%	21%	0.112	0.959	1.36	1.92	8	17	13	1	100%	1
5L8R_CLA_B_806	79%	24%	0.115	0.961	1.32	1.8	6	12	9	1	100%	1
5L8R_CLA_A_837	79%	24%	0.107	0.952	1.34	1.77	8	12	8	1	100%	1
5L8R_CLA_A_811	78%	23%	0.099	0.942	1.32	1.85	7	13	15	1	100%	1
5L8R_CLA_A_855	78%	23%	0.108	0.949	1.3	1.84	8	13	12	1	100%	1
5L8R_CLA_B_810	78%	23%	0.108	0.949	1.31	1.85	6	13	5	1	100%	1
5L8R_CLA_B_823	77%	20%	0.09	0.958	1.45	1.93	8	10	9	1	85%	1
5L8R_CLA_4_307	77%	21%	0.101	0.955	1.36	1.96	6	16	12	1	92%	1
5L8R_CLA_A_833	77%	23%	0.109	0.948	1.32	1.83	7	15	8	1	100%	1
5L8R_CLA_B_803	77%	24%	0.11	0.949	1.3	1.78	5	10	10	1	100%	1
5L8R_CLA_A_805	77%	23%	0.112	0.951	1.34	1.8	7	10	13	1	100%	1
5L8R_CLA_A_854	76%	23%	0.115	0.952	1.29	1.88	6	16	14	1	100%	1
5L8R_CLA_B_812	76%	23%	0.099	0.949	1.4	1.78	7	11	8	1	92%	1
5L8R_CLA_B_820	76%	25%	0.12	0.955	1.35	1.7	8	12	13	1	100%	1
5L8R_CLA_B_830	75%	23%	0.106	0.94	1.32	1.82	9	14	13	0	100%	1
5L8R_CLA_B_811	75%	23%	0.112	0.946	1.36	1.82	8	13	8	1	100%	1
5L8R_CLA_4_306	75%	23%	0.116	0.95	1.34	1.83	7	15	11	1	100%	1
5L8R_CLA_A_828	74%	22%	0.116	0.947	1.31	1.9	7	11	12	1	100%	1
5L8R_CLA_B_834	74%	21%	0.09	0.948	1.46	1.87	7	13	7	1	85%	1
5L8R_CLA_B_818	74%	24%	0.123	0.954	1.35	1.76	9	14	9	1	100%	1
5L8R_CLA_A_819	74%	24%	0.126	0.957	1.31	1.81	6	14	10	1	100%	1
5L8R_CLA_B_828	74%	24%	0.121	0.95	1.29	1.82	7	11	6	1	100%	1
5L8R_CLA_A_807	73%	21%	0.097	0.938	1.4	1.89	6	13	6	1	92%	1
5L8R_CLA_B_833	73%	22%	0.1	0.941	1.36	1.86	7	12	8	1	92%	1
5L8R_CLA_L_304	73%	21%	0.105	0.946	1.35	1.94	5	13	6	1	92%	1
5L8R_CLA_B_825	73%	22%	0.113	0.94	1.3	1.93	6	17	13	1	100%	1
5L8R_CLA_A_829	73%	24%	0.122	0.949	1.3	1.82	8	13	5	1	100%	1
5L8R_CLA_G_202	73%	19%	0.093	0.947	1.46	1.95	8	14	3	0	85%	1
5L8R_CLA_A_834	73%	24%	0.112	0.938	1.31	1.8	6	12	6	0	100%	1
5L8R_CLA_4_312	73%	18%	0.098	0.965	1.52	2.03	7	15	4	0	77%	1
5L8R_CLA_A_824	72%	24%	0.125	0.95	1.33	1.75	7	12	20	1	100%	1
5L8R_CLA_4_308	72%	20%	0.11	0.947	1.35	2.04	5	15	7	0	92%	1
5L8R_CLA_B_829	72%	23%	0.124	0.947	1.35	1.8	7	14	12	1	100%	1
5L8R_CLA_B_813	71%	16%	0.084	0.958	1.57	2.08	6	14	3	1	71%	1
5L8R_CLA_A_821	71%	25%	0.118	0.94	1.31	1.73	5	15	14	1	100%	1
5L8R_CLA_2_504	71%	20%	0.107	0.942	1.36	2	6	14	8	1	92%	1
5L8R_CLA_B_840	70%	24%	0.11	0.928	1.32	1.81	6	12	19	0	100%	1
5L8R_CLA_B_837	70%	19%	0.097	0.956	1.49	1.98	8	14	5	1	77%	1
5L8R_CLA_B_815	70%	23%	0.126	0.944	1.31	1.87	5	12	8	1	100%	1
5L8R_CLA_4_315	70%	23%	0.127	0.945	1.33	1.83	7	14	7	1	100%	1
5L8R_CLA_2_508	70%	19%	0.1	0.945	1.39	2.06	6	16	6	1	85%	1
5L8R_CLA_L_301	69%	19%	0.109	0.952	1.45	1.99	7	14	2	1	85%	1
5L8R_CLA_A_822	69%	21%	0.109	0.936	1.41	1.86	7	13	6	1	92%	1
5L8R_CLA_A_826	68%	20%	0.112	0.952	1.44	1.95	7	13	6	1	85%	1
5L8R_CLA_1_507	68%	23%	0.125	0.937	1.32	1.87	7	13	10	1	100%	1
5L8R_CLA_A_827	68%	23%	0.126	0.938	1.33	1.84	7	14	6	1	100%	1
5L8R_CLA_B_835	68%	21%	0.112	0.951	1.44	1.88	7	11	5	0	85%	1
5L8R_CLA_A_832	68%	24%	0.133	0.944	1.34	1.77	6	11	10	1	100%	1
5L8R_CLA_1_506	67%	19%	0.117	0.954	1.43	1.99	8	12	0	1	85%	1
5L8R_CLA_B_839	67%	24%	0.126	0.935	1.34	1.79	6	12	7	1	100%	1
5L8R_CLA_1_508	67%	22%	0.129	0.938	1.33	1.87	8	15	18	0	100%	1
5L8R_CLA_4_304	67%	18%	0.119	0.941	1.38	2.11	6	18	7	1	92%	1
5L8R_CLA_A_804	66%	23%	0.126	0.931	1.31	1.84	8	11	8	1	100%	1
5L8R_CLA_A_814	66%	22%	0.126	0.93	1.33	1.89	8	16	2	1	100%	1
5L8R_CLA_J_1102	66%	16%	0.088	0.946	1.54	2.1	6	11	6	1	69%	1
5L8R_CLA_2_505	66%	18%	0.108	0.947	1.5	2.02	9	13	5	1	80%	1
5L8R_CLA_B_817	65%	21%	0.123	0.938	1.4	1.93	8	13	4	1	92%	1
5L8R_CLA_3_308	65%	22%	0.135	0.936	1.32	1.9	6	16	19	1	100%	1
5L8R_CLA_A_810	64%	17%	0.108	0.949	1.52	2.07	8	11	5	1	77%	1
5L8R_CLA_B_805	64%	24%	0.124	0.923	1.33	1.78	7	11	10	1	100%	1
5L8R_CLA_B_822	64%	23%	0.136	0.934	1.35	1.81	8	13	8	1	100%	1
5L8R_CLA_2_510	63%	21%	0.123	0.933	1.38	1.9	7	14	7	1	92%	1
5L8R_CLA_A_818	63%	20%	0.118	0.938	1.44	1.92	9	13	15	1	86%	1
5L8R_CLA_4_311	62%	17%	0.101	0.945	1.57	2.03	6	10	2	1	71%	1
5L8R_CLA_B_827	62%	23%	0.148	0.939	1.3	1.86	8	13	5	1	100%	1
5L8R_CLA_A_813	61%	23%	0.141	0.931	1.29	1.88	7	14	10	1	100%	1
5L8R_CLA_4_318	61%	23%	0.143	0.933	1.29	1.86	6	13	11	1	100%	1
5L8R_CLA_4_310	61%	22%	0.128	0.931	1.4	1.85	9	11	8	1	92%	1
5L8R_CLA_B_821	61%	17%	0.103	0.944	1.59	2.02	7	11	0	1	71%	1
5L8R_CLA_A_812	61%	20%	0.128	0.944	1.46	1.94	7	14	9	0	85%	1
5L8R_CLA_A_838	59%	24%	0.138	0.921	1.34	1.79	7	13	5	1	100%	1
5L8R_CLA_2_514	59%	20%	0.121	0.931	1.44	1.96	7	12	4	1	85%	1
5L8R_CLA_A_831	59%	23%	0.13	0.911	1.33	1.83	5	15	8	1	100%	1
5L8R_CLA_B_808	59%	24%	0.132	0.912	1.35	1.75	7	12	10	1	100%	1
5L8R_CLA_3_316	58%	16%	0.097	0.927	1.58	2.07	9	13	5	1	71%	1
5L8R_CLA_2_509	58%	18%	0.111	0.93	1.49	1.99	5	13	3	1	77%	1
5L8R_CLA_A_836	58%	18%	0.118	0.934	1.49	2.05	6	15	7	0	78%	1
5L8R_CLA_B_816	57%	19%	0.12	0.923	1.45	1.96	8	11	5	1	85%	1
5L8R_CLA_F_303	57%	24%	0.126	0.901	1.32	1.8	6	12	8	0	100%	1
5L8R_CLA_3_309	57%	19%	0.132	0.934	1.48	1.98	8	15	3	0	85%	1
5L8R_CLA_A_815	56%	17%	0.114	0.942	1.61	1.99	8	13	1	1	69%	1
5L8R_CLA_3_315	56%	17%	0.119	0.933	1.49	2.08	5	13	7	1	77%	1
5L8R_CLA_A_820	56%	18%	0.129	0.943	1.53	2.01	8	12	1	1	77%	1
5L8R_CLA_4_305	56%	16%	0.122	0.935	1.56	2.08	8	16	3	1	77%	1
5L8R_CLA_3_307	55%	18%	0.13	0.926	1.45	2.05	7	16	7	1	85%	1
5L8R_CLA_A_817	55%	25%	0.147	0.914	1.33	1.74	6	11	6	1	100%	1
5L8R_CLA_2_511	55%	17%	0.119	0.927	1.52	2.07	7	13	4	1	77%	1
5L8R_CLA_A_823	55%	22%	0.123	0.903	1.41	1.83	8	13	3	1	92%	1
5L8R_CLA_A_842	53%	21%	0.106	0.881	1.36	1.94	7	13	11	1	92%	1
5L8R_CLA_G_201	53%	22%	0.135	0.897	1.34	1.88	7	15	11	1	100%	1
5L8R_CLA_3_317	52%	17%	0.123	0.933	1.6	1.97	8	11	6	1	71%	1
5L8R_CLA_1_504	52%	22%	0.14	0.897	1.32	1.88	6	16	12	1	100%	1
5L8R_CLA_G_203	51%	17%	0.092	0.898	1.57	2.02	7	12	3	1	71%	1
5L8R_CLA_1_505	50%	17%	0.113	0.916	1.58	2.02	8	11	1	0	71%	1
5L8R_CLA_B_831	49%	22%	0.136	0.897	1.37	1.83	7	13	7	1	92%	1
5L8R_CLA_3_305	49%	18%	0.111	0.885	1.46	2.07	8	14	22	1	85%	1
5L8R_CLA_1_516	46%	21%	0.129	0.878	1.4	1.89	7	14	5	1	92%	1
5L8R_CLA_A_835	44%	20%	0.133	0.889	1.47	1.93	8	14	5	1	85%	1
5L8R_CLA_4_309	44%	17%	0.134	0.903	1.48	2.11	7	13	12	1	77%	1
5L8R_CLA_1_515	43%	18%	0.133	0.911	1.62	1.88	9	10	8	1	69%	1
5L8R_CLA_3_313	42%	22%	0.146	0.878	1.37	1.89	6	14	6	1	92%	1
5L8R_CLA_1_509	40%	18%	0.13	0.881	1.5	2.05	7	16	3	1	77%	1
5L8R_CLA_G_204	40%	23%	0.156	0.865	1.31	1.86	9	13	14	1	100%	1
5L8R_CLA_A_816	39%	17%	0.125	0.881	1.58	2.04	7	11	1	1	71%	1
5L8R_CLA_L_305	38%	18%	0.129	0.872	1.54	1.98	9	13	2	1	77%	1
5L8R_CLA_1_511	38%	17%	0.157	0.912	1.58	1.98	6	11	1	1	71%	1
5L8R_CLA_L_303	33%	18%	0.132	0.851	1.5	2.04	7	12	3	1	77%	1
5L8R_CLA_3_310	30%	15%	0.141	0.845	1.5	2.23	7	11	5	1	77%	1
5L8R_CLA_1_510	28%	13%	0.146	0.848	1.62	2.34	7	14	10	1	71%	1
5L8R_CLA_K_1001	27%	16%	0.148	0.848	1.59	2.11	7	13	6	1	69%	1
5L8R_CLA_3_306	22%	18%	0.152	0.803	1.5	1.99	7	13	8	1	80%	1
5L8R_CLA_1_513	20%	23%	0.209	0.81	1.31	1.84	7	14	3	1	100%	1
5L8R_CLA_K_1002	19%	21%	0.164	0.769	1.4	1.9	8	14	5	1	92%	1
5L8R_CLA_3_312	15%	16%	0.155	0.76	1.56	2.1	8	13	0	1	74%	1
5L8R_CLA_J_1105	13%	14%	0.169	0.749	1.5	2.3	6	18	13	1	77%	1
5L8R_CLA_3_311	12%	15%	0.193	0.782	1.68	2.1	8	13	0	1	63%	1
5L8R_CLA_H_1000	10%	21%	0.183	0.696	1.39	1.9	8	14	5	1	92%	1
5L8R_CLA_K_1003	4%	7%	0.158	0.647	2.6	2.31	10	8	1	1	42%	1
5L8R_CLA_K_1004	1%	7%	0.179	0.456	2.6	2.18	10	7	2	1	42%	1
2O01_CLA_B_1209	94%	7%	0.056	0.981	2.21	2.52	10	21	46	2	85%	1
4XK8_CLA_b_803	92%	8%	0.072	0.963	2.07	2.52	16	26	0	1	100%	1
4Y28_CLA_B_1235	84%	6%	0.094	0.955	2.36	2.64	19	22	9	1	100%	1
4RKU_CLA_B_9010	78%	7%	0.103	0.945	2.2	2.61	16	25	28	1	100%	1
7DKZ_CLA_A_808	72%	27%	0.153	0.977	1.36	1.59	8	11	8	1	100%	1
1VF5_CLA_B_201	100%	10%	0.039	0.993	1.92	2.34	10	17	9	3	100%	1
7M78_CLA_B_840	100%	32%	0.041	0.991	1.37	1.33	4	8	2	1	100%	1
5GTI_CLA_a_405	100%	7%	0.036	0.982	2.11	2.77	15	30	0	1	100%	1
3WU2_CLA_A_405	100%	11%	0.037	0.982	2.07	2.09	17	25	0	1	100%	1
5V2C_CLA_B_604	99%	14%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left:-5px; } 5L8R | pdb_00005l8r

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5L8R designated by the RCSB

5L8R | pdb_00005l8r