Ligand validation:5MX2

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 5MX2 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5MX2_SQD_a_410	55%	36%	0.147	0.915	1.13	1.37	4	11	0	0	100%	1
5MX2_SQD_A_409	51%	30%	0.148	0.902	1.12	1.65	4	11	0	0	100%	1
5MX2_SQD_a_412	34%	46%	0.16	0.855	0.89	1.17	2	6	0	0	93%	1
5MX2_SQD_f_102	29%	27%	0.228	0.922	1.27	1.68	4	10	0	0	80%	1
5MX2_SQD_L_101	25%	6%	0.166	0.82	1.22	3.78	4	10	0	0	89%	1
5MX2_SQD_D_412	25%	24%	0.211	0.881	1.27	1.8	4	10	0	0	80%	1
5MX2_SQD_b_601	23%	32%	0.18	0.803	1.14	1.53	4	13	0	0	100%	1
5MX2_SQD_A_411	18%	37%	0.197	0.786	1.14	1.34	4	8	0	0	100%	1
5V2C_SQD_a_413	94%	21%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
5GTI_SQD_A_409	91%	29%	0.066	0.95	0.98	1.84	3	13	0	0	100%	1
5WS6_SQD_A_411	87%	32%	0.084	0.954	0.88	1.78	2	12	0	0	100%	1
3WU2_SQD_A_412	78%	25%	0.089	0.932	0.86	2.15	2	17	0	0	100%	1
6DHE_SQD_A_412	78%	20%	0.113	0.961	1.05	2.27	5	14	0	0	96%	1
8IRC_SQD_a_411	77%	29%	0.119	0.96	0.96	1.83	3	13	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.