DMA: DIMETHYLALLYL DIPHOSPHATE
DMA is a Ligand Of Interest in 5YNT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5YNT_DMA_A_401 | 98% | 50% | 0.062 | 0.988 | 0.97 | 0.95 | - | - | 0 | 0 | 100% | 1 |
5YNT_DMA_B_401 | 96% | 51% | 0.076 | 0.985 | 0.73 | 1.15 | - | 2 | 3 | 0 | 100% | 1 |
5YNU_DMA_B_401 | 68% | 25% | 0.14 | 0.953 | 1.56 | 1.51 | 1 | 2 | 1 | 0 | 100% | 1 |
7VQA_DMA_A_301 | 99% | 58% | 0.057 | 0.987 | 0.86 | 0.77 | - | - | 0 | 0 | 100% | 1 |
3PDE_DMA_D_309 | 98% | 50% | 0.068 | 0.987 | 0.64 | 1.27 | - | 2 | 1 | 0 | 100% | 1 |
4GP1_DMA_A_402 | 96% | 35% | 0.071 | 0.981 | 1.9 | 0.71 | 5 | - | 1 | 0 | 100% | 1 |
3B06_DMA_C_701 | 95% | 40% | 0.076 | 0.982 | 0.68 | 1.64 | - | 4 | 1 | 0 | 100% | 1 |
8JYC_DMA_D_501 | 94% | 50% | 0.091 | 0.989 | 0.88 | 1.06 | 1 | 1 | 0 | 0 | 100% | 1 |