SPD: SPERMIDINE
SPD is a Ligand Of Interest in 7XIF designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7XIF_SPD_C_302 | 71% | 68% | 0.131 | 0.952 | 0.59 | 0.63 | - | - | 2 | 0 | 100% | 1 |
7XIF_SPD_H_302 | 68% | 87% | 0.134 | 0.945 | 0.42 | 0.29 | - | - | 2 | 0 | 100% | 1 |
7XIF_SPD_B_302 | 67% | 89% | 0.148 | 0.956 | 0.36 | 0.29 | - | - | 3 | 0 | 100% | 1 |
7XIF_SPD_A_302 | 58% | 79% | 0.173 | 0.954 | 0.54 | 0.34 | - | - | 1 | 0 | 100% | 1 |
7XIF_SPD_D_302 | 40% | 74% | 0.239 | 0.951 | 0.25 | 0.75 | - | - | 3 | 0 | 100% | 1 |
7XIH_SPD_A_302 | 72% | 38% | 0.111 | 0.936 | 1.18 | 1.26 | 1 | 1 | 4 | 0 | 100% | 1 |
4C0Z_SPD_A_1223 | 95% | 63% | 0.064 | 0.966 | 0.7 | 0.73 | - | - | 3 | 0 | 100% | 1 |
5JC9_SPD_DA_3190 | 92% | 97% | 0.089 | 0.979 | 0.12 | 0.19 | - | - | 0 | 0 | 100% | 1 |
5J7L_SPD_DA_3187 | 90% | 92% | 0.094 | 0.978 | 0.19 | 0.33 | - | - | 0 | 0 | 100% | 1 |
7XJM_SPD_B_401 | 90% | 91% | 0.078 | 0.961 | 0.25 | 0.33 | - | - | 0 | 0 | 100% | 1 |