XMP: XANTHOSINE-5'-MONOPHOSPHATE
XMP is a Ligand Of Interest in 8P4Q designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8P4Q_XMP_A_402 | 85% | 20% | 0.108 | 0.972 | 0.85 | 2.47 | 1 | 7 | 1 | 0 | 100% | 0.66 |
8P4Q_XMP_D_402 | 85% | 19% | 0.109 | 0.973 | 0.95 | 2.43 | 2 | 7 | 2 | 0 | 100% | 0.64 |
8P4Q_XMP_C_402 | 83% | 21% | 0.109 | 0.968 | 0.89 | 2.39 | 1 | 7 | 1 | 0 | 100% | 0.56 |
8P4Q_XMP_H_402 | 83% | 19% | 0.104 | 0.962 | 0.96 | 2.43 | 2 | 6 | 2 | 0 | 100% | 0.62 |
8P4Q_XMP_F_402 | 82% | 20% | 0.102 | 0.958 | 0.96 | 2.38 | 2 | 7 | 1 | 0 | 100% | 0.72 |
8P4Q_XMP_E_402 | 81% | 21% | 0.109 | 0.962 | 0.93 | 2.37 | 2 | 7 | 1 | 0 | 100% | 0.56 |
8P4Q_XMP_B_402 | 81% | 19% | 0.112 | 0.965 | 0.94 | 2.45 | 2 | 7 | 1 | 0 | 100% | 0.55 |
8P4Q_XMP_G_402 | 77% | 20% | 0.114 | 0.954 | 0.97 | 2.35 | 2 | 7 | 1 | 0 | 100% | 0.63 |
8P37_XMP_A_401 | 98% | 22% | 0.063 | 0.984 | 1.42 | 1.84 | 3 | 4 | 2 | 0 | 100% | 1 |
4ZQM_XMP_A_601 | 98% | 17% | 0.052 | 0.978 | 1.12 | 2.47 | 2 | 4 | 1 | 0 | 100% | 1 |
4X3Z_XMP_A_500 | 98% | 15% | 0.061 | 0.981 | 1.48 | 2.31 | 3 | 5 | 3 | 0 | 100% | 1 |
3BPW_XMP_A_1000 | 96% | 11% | 0.062 | 0.973 | 1.12 | 3 | 1 | 10 | 1 | 0 | 100% | 1 |
2VXO_XMP_B_1694 | 96% | 14% | 0.076 | 0.987 | 1.01 | 2.78 | 2 | 7 | 1 | 0 | 100% | 1 |
1MEI_XMP_A_602 | 96% | 10% | 0.06 | 0.969 | 1.66 | 2.61 | 4 | 5 | 2 | 0 | 100% | 1 |