Download MendeleyElectrocatalytic Generation of Chiral Fumarate Derivatives by Flavocytochrome c3
Wardrope, C., Mowat, C.G., Reid, G.A., Chapman, S.K.To be published.
1Y0P
Flavocytochrome c3 with mesaconate bound
- PDB DOI: https://doi.org/10.2210/pdb1Y0P/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Shewanella frigidimarina
- Expression System: Shewanella frigidimarina
- Mutation(s): No
- Deposited: 2004-11-16 Released: 2005-11-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 ?
- R-Value Free: 0.184
- R-Value Work: 0.151
- R-Value Observed: 0.152
Starting Model: experimental
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This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fumarate reductase flavoprotein subunit | 571 | Shewanella frigidimarina | Mutation(s): 0 Gene Names: fccA EC: 1.3.99.1 (PDB Primary Data), 1.3.2.4 (UniProt) |  | |
UniProt | |||||
Find proteins for P0C278 (Shewanella frigidimarina) Explore P0C278 Go to UniProtKB: P0C278 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0C278 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | G [auth A] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | ||
| HEM Query on HEM | C [auth A], D [auth A], E [auth A], F [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | ||
| MEZ Query on MEZ | H [auth A] | (2E)-2-METHYLBUT-2-ENEDIOIC ACID C5 H6 O4 HNEGQIOMVPPMNR-NSCUHMNNSA-N |  | ||
| NA Query on NA | B [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 ?
- R-Value Free: 0.184
- R-Value Work: 0.151
- R-Value Observed: 0.152
- Space Group: P 1 21 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 45.449 | ¦Á = 90 |
| b = 91.687 | ¦Â = 91.13 |
| c = 78.287 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2005-11-08 Deposition Author(s): Mowat, C.G., Wardrope, C., Reid, G.A., Chapman, S.K.
Revision History (Full details and data files)
- Version 1.0: 2005-11-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description, Structure summary - Version 1.4: 2024-11-13
Changes: Structure summary
