Download MendeleyStructural study of Project ID ST2577 from Sulfolobus tokodaii strain7
Asada, Y., Kunishima, N.To be published.
2EER
Structural study of Project ID ST2577 from Sulfolobus tokodaii strain7
- PDB DOI: https://doi.org/10.2210/pdb2EER/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Sulfurisphaera tokodaii str. 7
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-02-17 Released: 2007-08-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.222
- R-Value Work: 0.180
- R-Value Observed: 0.182
Starting Model: experimental
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This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| NAD-dependent alcohol dehydrogenase | 347 | Sulfurisphaera tokodaii str. 7 | Mutation(s): 0 EC: 1.1.1.1 |  | |
UniProt | |||||
Find proteins for Q96XE0 (Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)) Explore Q96XE0 Go to UniProtKB: Q96XE0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q96XE0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAD Query on NAD | D [auth A], F [auth B] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |  | ||
| ZN Query on ZN | C [auth A], E [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.222
- R-Value Work: 0.180
- R-Value Observed: 0.182
- Space Group: P 43 21 2
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 86.171 | ¦Á = 90 |
| b = 86.171 | ¦Â = 90 |
| c = 165.87 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| MOLREP | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2007-08-21 Deposition Author(s): Asada, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-08-21
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
