Download MendeleyThe Crystal structure of Dbr2
Li, L.To be published.
5DXX
Crystal structure of Dbr2
- PDB DOI: https://doi.org/10.2210/pdb5DXX/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Artemisia annua
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2015-09-24 Released: 2016-10-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 ?
- R-Value Free: 0.163
- R-Value Work: 0.130
- R-Value Observed: 0.131
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Artemisinic aldehyde Delta(11(13)) reductase | 387 | Artemisia annua | Mutation(s): 0 Gene Names: DBR2 EC: 1.3.1.92 |  | |
UniProt | |||||
Find proteins for C5H429 (Artemisia annua) Explore C5H429 Go to UniProtKB: C5H429 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C5H429 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMN Query on FMN | B [auth A] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.45 ?
- R-Value Free: 0.163
- R-Value Work: 0.130
- R-Value Observed: 0.131
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 52.58 | ¦Á = 90 |
| b = 80.97 | ¦Â = 90 |
| c = 86.16 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XSCALE | data reduction |
Entry History
Deposition Data
- Released Date: 2016-10-05 Deposition Author(s): Li, L., Chen, T.T., Xu, Y.C.
Revision History (Full details and data files)
- Version 1.0: 2016-10-05
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description
