6TNA

CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT

PDB DOI: https://doi.org/10.2210/pdb6TNA/pdb
Entry: 6TNA supersedes: 5TNA
NAKB: 6TNA

Classification: T-RNA
Organism(s): Saccharomyces cerevisiae
Mutation(s): No

Deposited: 1978-11-16 Released: 1979-01-16
Deposition Author(s): Sussman, J.L., Holbrook, S.R., Warrant, R.W., Church, G.M., Kim, S.-H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.70 ?
R-Value Observed: 0.198

wwPDB Validation 3D Report Full Report

This is version 2.0 of the entry. See complete history.

Literature

Crystal structure of yeast phenylalanine transfer RNA. I. Crystallographic refinement.

Sussman, J.L., Holbrook, S.R., Warrant, R.W., Church, G.M., Kim, S.H.

(1978) J Mol Biol 123: 607-630

PubMed: 357742 Search on PubMed
DOI: https://doi.org/10.1016/0022-2836(78)90209-7
Primary Citation of Related Structures:
6TNA

Macromolecule Content

Total Structure Weight: 24.99 kDa
Atom Count: 1,740
Modelled Residue Count: 76
Deposited Residue Count: 76
Unique nucleic acid chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Length	Organism	Image
TRNAPHE	A	76	Saccharomyces cerevisiae
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain D [auth A] SDF format, chain B [auth A] SDF format, chain E [auth A] MOL2 format, chain C [auth A] MOL2 format, chain D [auth A] MOL2 format, chain B [auth A] MOL2 format, chain E [auth A] mmCIF format, chain C [auth A] mmCIF format, chain D [auth A] mmCIF format, chain B [auth A] mmCIF format, chain E [auth A]	B [auth A], C [auth A], D [auth A], E [auth A]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Focus chain C [auth A] Focus chain D [auth A] Focus chain E [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.70 ?
R-Value Observed: 0.198
Space Group: P 2₁ 2 2₁

Unit Cell:

Length ( ? )	Angle ( ? )
a = 33	α = 90
b = 56	β = 90
c = 161	γ = 90

Software Package:

Software Name	Purpose
CORELS	refinement

Structure Validation

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Entry History

Deposition Data

Released Date: 1979-01-16

Deposition Author(s):

This entry supersedes: 5TNA

Revision History (Full details and data files)

Version 1.0: 1979-01-16
Type: Initial release
Version 1.1: 2008-05-22
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Advisory, Version format compliance
Version 2.0: 2023-09-27
Type: Remediation
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Other

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