Proteorhodopsin Insights into Molecular Mechanism of Vectorial Proton Transport
Shevchenko, V., Gushchin, I., Polovinkin, V., Kovalev, K.(2025) Sci Adv 
Experimental Data Snapshot
Starting Model: experimental
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(2025) Sci Adv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Bacteriorhodopsin | 220 | Candidatus Actinomarina minuta | Mutation(s): 0  Membrane Entity: Yes  | ![]() | |
UniProt | |||||
Find proteins for S5DM51 (Candidatus Actinomarina minuta) Explore S5DM51  Go to UniProtKB:  S5DM51 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | S5DM51 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
OLC Query on OLC | HA [auth B], IA [auth B], Q [auth A], R [auth A] | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate C21 H40 O4 RZRNAYUHWVFMIP-GDCKJWNLSA-N | |||
OLB Query on OLB | GA [auth B], P [auth A] | (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate C21 H40 O4 RZRNAYUHWVFMIP-QJRAZLAKSA-N | |||
RET (Subject of Investigation/LOI) Query on RET | JA [auth B], S [auth A] | RETINAL C20 H28 O NCYCYZXNIZJOKI-OVSJKPMPSA-N | |||
LFA Query on LFA | AA [auth B] BA [auth B] C [auth A] CA [auth B] D [auth A] | EICOSANE C20 H42 CBFCDTFDPHXCNY-UHFFFAOYSA-N |
Length ( ? ) | Angle ( ? ) |
---|---|
a = 40.686 | ¦Á = 63.66 |
b = 56.628 | ¦Â = 78.98 |
c = 57.386 | ¦Ã = 80.33 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Agence Nationale de la Recherche (ANR) | France | ANR-19-CE11-0026 |
French Infrastructure for Integrated Structural Biology (FRISBI) | France | ANR-10-INBS-05-02 |
Grenoble Alliance for Integrated Structural Cell Biology (GRAL) | France | ANR-17-EURE-0003 |