Download MendeleyCrystal Structure of Amycolatopsis jejuensis Multiple Inositol Polyphosphate Phosphatase, apo-protein
Acquistapace, I.M., Brearley, C.A., Hemmings, A.M.To be published.
7ZGG | pdb_00007zgg
Crystal Structure of Amycolatopsis jejuensis Multiple Inositol Polyphosphate Phosphatase, phosphate-bound
- PDB DOI: https://doi.org/10.2210/pdb7ZGG/pdb
- Classification: HYDROLASE
- Organism(s): Amycolatopsis jejuensis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2022-04-03 Released: 2022-05-18
- Funding Organization(s): Biotechnology and Biological Sciences Research Council (BBSRC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.66 ?
- R-Value Free: 0.226 (Depositor), 0.230 (DCC)
- R-Value Work: 0.180 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.182 (Depositor)
Starting Model: experimental
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This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Multiple inositol-polyphosphate phosphatase | 417 | Amycolatopsis jejuensis | Mutation(s): 0 EC: 3.1.3.62 (PDB Primary Data), 3.1.3.80 (UniProt) |  | |
UniProt | |||||
Find proteins for A0A915Q9M0 (Amycolatopsis jejuensis) Explore A0A915Q9M0 Go to UniProtKB: A0A915Q9M0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A915Q9M0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 (Subject of Investigation/LOI) Query on PO4 | C [auth A], E [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
| GOL Query on GOL | D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.66 ?
- R-Value Free: 0.226 (Depositor), 0.230 (DCC)
- R-Value Work: 0.180 (Depositor), 0.180 (DCC)
- R-Value Observed: 0.182 (Depositor)
Space Group: P 1 21 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 68.887 | ¦Á = 90 |
| b = 86.91 | ¦Â = 97.928 |
| c = 70.54 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| GDA | data collection |
| PHENIX | refinement |
| xia2 | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-05-18 Deposition Author(s): Acquistapace, I.M., Brearley, C.A., Hemmings, A.M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Biotechnology and Biological Sciences Research Council (BBSRC) | United Kingdom | BB/M022978/1 |
Revision History (Full details and data files)
- Version 1.0: 2022-05-18
Type: Initial release - Version 1.1: 2024-01-31
Changes: Data collection, Refinement description - Version 1.2: 2024-11-20
Changes: Structure summary
