Download Mendeleycrystal structure of PPAT mutant P8A
Yin, H.S.To be published.
8XSV
crystal structure of PPAT mutant P8A
- PDB DOI: https://doi.org/10.2210/pdb8XSV/pdb
- Classification: TRANSFERASE
- Organism(s): Helicobacter pylori 26695
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2024-01-10 Released: 2024-10-30
- Funding Organization(s): Ministry of Science and Technology (MoST, Taiwan)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 ?
- R-Value Free: 0.250
- R-Value Work: 0.196
- R-Value Observed: 0.198
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phosphopantetheine adenylyltransferase | 155 | Helicobacter pylori 26695 | Mutation(s): 1 Gene Names: coaD, kdtB, HP_1475 EC: 2.7.7.3 |  | |
UniProt | |||||
Find proteins for O26010 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore O26010 Go to UniProtKB: O26010 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O26010 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| COD (Subject of Investigation/LOI) Query on COD | G [auth A] H [auth B] I [auth C] J [auth D] K [auth E] | DEPHOSPHO COENZYME A C21 H35 N7 O13 P2 S KDTSHFARGAKYJN-IBOSZNHHSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 ?
- R-Value Free: 0.250
- R-Value Work: 0.196
- R-Value Observed: 0.198
- Space Group: P 21 21 2
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 95.893 | ¦Á = 90 |
| b = 126.898 | ¦Â = 90 |
| c = 89.98 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-10-30 Deposition Author(s): Yin, H.S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Science and Technology (MoST, Taiwan) | Taiwan | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-10-30
Type: Initial release
