Download MendeleyT450C mutant of repeat domain 2 from Clostridium perfringens adhesin CPE0147 without intramolecular ester bond
Squire, C.J., Yosaatmadja, Y.To be published.
9BLO | pdb_00009blo
T450C mutant of repeat domain 2 from Clostridium perfringens adhesin CPE0147 without intramolecular ester bond
- PDB DOI: https://doi.org/10.2210/pdb9BLO/pdb
- Classification: UNKNOWN FUNCTION
- Organism(s): Clostridium perfringens B str. ATCC 3626
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2024-05-01 Released: 2025-05-07
- Funding Organization(s): Marsden Fund
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 ?
- R-Value Free: 0.229 (Depositor), 0.232 (DCC)
- R-Value Work: 0.193 (Depositor), 0.200 (DCC)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Surface anchored protein | 156 | Clostridium perfringens B str. ATCC 3626 | Mutation(s): 1 Gene Names: AC1_0147 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CA Query on CA | D [auth A], F [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| MG Query on MG | C [auth A], E [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 ?
- R-Value Free: 0.229 (Depositor), 0.232 (DCC)
- R-Value Work: 0.193 (Depositor), 0.200 (DCC)
Space Group: P 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 39.983 | ¦Á = 95.135 |
| b = 44.405 | ¦Â = 109.36 |
| c = 50.102 | ¦Ă = 110.122 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-05-07 Deposition Author(s): Squire, C.J., Yosaatmadja, Y.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Marsden Fund | New Zealand | -- |
Revision History (Full details and data files)
- Version 1.0: 2025-05-07
Type: Initial release
