9I2S | pdb_00009i2s

Velvet domain of the transcriptional regulator VeA

PDB DOI: https://doi.org/10.2210/pdb9I2S/pdb

Classification: CELL CYCLE
Organism(s): Aspergillus nidulans
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-01-22 Released: 2025-05-07
Deposition Author(s): Neumann, P., Ficner, R.
Funding Organization(s): Other government

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.40 ?
R-Value Free:
0.253 (Depositor), 0.253 (DCC)
R-Value Work:
0.219 (Depositor), 0.220 (DCC)
R-Value Observed:
0.221 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Velvet domain of the transcriptional regulator VeA

Neumann, P., Ficner, R.

To be published.

Macromolecule Content

Total Structure Weight: 98.86 kDa
Atom Count: 5,530
Modelled Residue Count: 682
Deposited Residue Count: 896
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Developmental and secondary metabolism regulator veA	A, B, C, D	224	Aspergillus nidulans	Mutation(s): 0 Gene Names: veA, ANIA_01052
UniProt
Find proteins for C8VTV4 (Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)) Explore C8VTV4 Go to UniProtKB: C8VTV4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	C8VTV4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.40 ?
R-Value Free: 0.253 (Depositor), 0.253 (DCC)
R-Value Work: 0.219 (Depositor), 0.220 (DCC)
R-Value Observed: 0.221 (Depositor)

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( ? )	Angle ( ? )
a = 106.04	α = 90
b = 156.08	β = 90
c = 52.73	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XSCALE	data scaling
XDS	data reduction
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-05-07

Deposition Author(s):

Funding Organization	Location	Grant Number
Other government		--

Revision History (Full details and data files)

Version 1.0: 2025-05-07
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.