Ligand validation:5NDF

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NDF_EDO_D_603	62%	69%	0.135	0.927	1.12	0.1	-	-	1	0	100%	1
5NDF_EDO_E_603	37%	81%	0.182	0.881	0.76	0.08	-	-	0	0	100%	1
5NDF_EDO_A_604	33%	64%	0.183	0.861	1.05	0.34	-	-	0	0	100%	1
5NDF_EDO_B_603	25%	85%	0.157	0.791	0.24	0.5	-	-	0	0	100%	1
5NDF_EDO_A_606	23%	77%	0.231	0.854	0.69	0.24	-	-	0	0	100%	1
5NDF_EDO_A_605	16%	72%	0.209	0.779	0.81	0.3	-	-	1	0	100%	1
5NDF_EDO_A_603	11%	29%	0.312	0.833	1.39	1.43	-	-	2	0	100%	1
5NDF_EDO_F_603	7%	83%	0.285	0.732	0.53	0.26	-	-	1	0	100%	1
5NDF_EDO_A_607	6%	83%	0.222	0.646	0.47	0.31	-	-	0	0	100%	1
5NDF_EDO_C_603	1%	85%	0.368	0.447	0.57	0.19	-	-	0	0	100%	1
4D0Z_EDO_B_1572	81%	69%	0.099	0.951	0.53	0.65	-	-	1	0	100%	1
5FV9_EDO_E_1573	66%	58%	0.139	0.944	0.88	0.72	-	-	0	0	100%	1
6ANS_EDO_A_404	100%	89%	0.029	0.995	0.57	0.07	-	-	0	0	100%	1
4ITB_EDO_A_503	100%	88%	0.028	0.99	0.38	0.29	-	-	0	0	100%	1
4FQI_EDO_A_401	100%	85%	0.032	0.992	0.46	0.29	-	-	0	0	100%	1
4KXW_EDO_A_1003	100%	73%	0.033	0.993	0.64	0.4	-	-	0	0	100%	1
8JK3_EDO_A_304	100%	81%	0.033	0.992	0.22	0.58	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.