Download MendeleyX-ray crystallographic studies of archaerhodopsin
Enami, N., Okumua, H., Kouyama, T.(2003) J Photosci 9: 320-322
1UAZ
Crystal structure of archaerhodopsin-1
- PDB DOI: https://doi.org/10.2210/pdb1UAZ/pdb
- Classification: PROTON TRANSPORT
- Organism(s): Halorubrum ezzemoulense
- Mutation(s): No
- Membrane Protein: Yes OPMPDBTMMemProtMDmpstruc
- Deposited: 2003-03-26 Released: 2003-04-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.40 ?
- R-Value Free: 0.282
- R-Value Work: 0.230
Starting Model: experimental
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This is version 1.4 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| archaerhodopsin-1 | 254 | Halorubrum ezzemoulense | Mutation(s): 0 Membrane Entity: Yes |  | |
UniProt | |||||
Find proteins for P69051 (Halorubrum ezzemoulense) Explore P69051 Go to UniProtKB: P69051 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69051 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| RET Query on RET | C [auth A], D [auth B] | RETINAL C20 H28 O NCYCYZXNIZJOKI-OVSJKPMPSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.40 ?
- R-Value Free: 0.282
- R-Value Work: 0.230
- Space Group: P 43 21 2
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 128.1 | ¦Á = 90 |
| b = 128.1 | ¦Â = 90 |
| c = 117.6 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| SCALA | data scaling |
| XTALVIEW | refinement |
| CNS | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Released Date: 2003-04-15 Deposition Author(s): Enami, N., Okumua, H., Kouyama, T.
Revision History (Full details and data files)
- Version 1.0: 2003-04-15
Type: Initial release - Version 1.1: 2007-10-16
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.4: 2024-10-30
Changes: Structure summary
