Download MendeleyThe Structure of PNP Oxidase from S. Cerevisiae
Shi, W., Ostrov, D.A., Gerchman, S.E., Graziano, V., Kycia, H., Studier, B., Almo, S.C.To be published.
1CI0
PNP OXIDASE FROM SACCHAROMYCES CEREVISIAE
- PDB DOI: https://doi.org/10.2210/pdb1CI0/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Saccharomyces cerevisiae
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 1999-04-06 Released: 1999-08-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 ?
- R-Value Free: 0.274
- R-Value Work: 0.225
- R-Value Observed: 0.230
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PROTEIN (PNP OXIDASE) | 228 | Saccharomyces cerevisiae | Mutation(s): 0 EC: 1.4.3.5 |  | |
UniProt | |||||
Find proteins for P38075 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P38075 Go to UniProtKB: P38075 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P38075 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMN Query on FMN | C [auth A], D [auth B] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 ?
- R-Value Free: 0.274
- R-Value Work: 0.225
- R-Value Observed: 0.230
- Space Group: P 32 2 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 74.97 | ¦Á = 90 |
| b = 74.97 | ¦Â = 90 |
| c = 157.14 | ¦Ă = 120 |
| Software Name | Purpose |
|---|---|
| X-PLOR | refinement |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 1999-08-25 Deposition Author(s): Shi, W., Ostrov, D.A., Gerchman, S.E., Graziano, V., Kycia, H., Studier, B., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 1999-08-25
Type: Initial release - Version 1.1: 2008-04-26
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-02-03
Changes: Derived calculations, Structure summary - Version 1.4: 2023-12-27
Changes: Data collection, Database references
