Download MendeleyCrystal Structure of Escherichia Coli Putative N-Acetylmannosamine Kinase
Patskovsky, Y., Almo, S.C.To be published.
2AA4
Crystal structure of Escherichia coli putative N-ACETYLMANNOSAMINE KINASE, New York Structural Genomics Consortium
- PDB DOI: https://doi.org/10.2210/pdb2AA4/pdb
- Classification: TRANSFERASE
- Organism(s): Escherichia coli
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2005-07-13 Released: 2005-07-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.243
- R-Value Work: 0.179
- R-Value Observed: 0.180
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative N-acetylmannosamine kinase | 289 | Escherichia coli | Mutation(s): 0 Gene Names: nanK EC: 2.7.1.60 |  | |
UniProt | |||||
Find proteins for P45425 (Escherichia coli (strain K12)) Explore P45425 Go to UniProtKB: P45425 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P45425 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | C [auth A], D [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.243
- R-Value Work: 0.179
- R-Value Observed: 0.180
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 40.991 | ¦Á = 90 |
| b = 75.841 | ¦Â = 90 |
| c = 166.646 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| REFMAC | refinement |
Entry History
Deposition Data
- Released Date: 2005-07-19 Deposition Author(s): Patskovsky, Y., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2005-07-19
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-02-03
Changes: Derived calculations, Structure summary - Version 1.4: 2024-02-14
Changes: Data collection, Database references, Refinement description
