Download MendeleySolution structure of the zf-RanBP domain of YY1-associated factor 2
Zhang, H.P., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S.To be published.
2D9G
Solution structure of the zf-RanBP domain of YY1-associated factor 2
- PDB DOI: https://doi.org/10.2210/pdb2D9G/pdb
- Classification: TRANSCRIPTION
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2005-12-09 Released: 2006-06-09
Experimental Data Snapshot
- Method: SOLUTION NMR
- Conformers Calculated: 100
- Conformers Submitted: 20
- Selection Criteria: target function,structures with the lowest energy,structures with the least restraint violations
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
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(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| YY1-associated factor 2 | 53 | Homo sapiens | Mutation(s): 0 Gene Names: YAF2 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8IY57 (Homo sapiens) Explore Q8IY57 Go to UniProtKB: Q8IY57 | |||||
PHAROS: Q8IY57 GTEx: ENSG00000015153 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8IY57 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | B [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: SOLUTION NMR
- Conformers Calculated: 100
- Conformers Submitted: 20
- Selection Criteria: target function,structures with the lowest energy,structures with the least restraint violations
Entry History
Deposition Data
- Released Date: 2006-06-09 Deposition Author(s): Zhang, H.P., Izumi, K., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2006-06-09
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations - Version 1.4: 2024-05-29
Changes: Data collection
